RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 CACNA1GO43497 2377 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 PRSS37A4D1T9 235 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 NPIPA5E9PKD4 350 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 ACOT7O00154 380 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 EIF1AYO14602 144 aaKnown RBP18.6■□□□□ 0.57
PNKP-203ENST00000593946 SEC14L5O43304 696 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 RAMP1O60894 148 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 RENP00797 406 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 IGHA1P01876 353 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 ADRB1P08588 477 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 ID4P47928 161 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 SUCLG1P53597 346 aaKnown RBP18.6■□□□□ 0.57
PNKP-203ENST00000593946 RAC3P60763 192 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 MELKQ14680 651 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 SYT6Q5T7P8 510 aaPredicted RBP18.6■□□□□ 0.57
PNKP-203ENST00000593946 ZNRF4Q8WWF5 429 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 TM9SF4Q92544 642 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 CRELD1Q96HD1 420 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 OXGR1Q96P68 337 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 JAM3Q9BX67 310 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 SRXN1Q9BYN0 137 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 SLC6A15Q9H2J7 730 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 VSX1Q9NZR4 365 aaPredicted RBP18.6■□□□□ 0.57
PNKP-203ENST00000593946 CLEC2DQ9UHP7 191 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 NPIPA1Q9UND3 350 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 RRP8O43159 456 aaKnown RBP18.59■□□□□ 0.57
PNKP-203ENST00000593946 TRAF3IP2O43734 574 aaPredicted RBP18.59■□□□□ 0.57
PNKP-203ENST00000593946 BCL10O95999 233 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 LHX2P50458 406 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 AGFG1P52594 562 aaKnown RBP18.59■□□□□ 0.57
PNKP-203ENST00000593946 CLDN15P56746 228 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 GGTLC2Q14390 218 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 RNFT1Q5M7Z0 435 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 FAM205BPQ63HN1 556 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 TMEM225Q6GV28 225 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 TRILQ7L0X0 811 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 UEVLDQ8IX04 471 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 DCBLD2Q96PD2 775 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 SYT4Q9H2B2 425 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 ZDHHC11Q9H8X9 412 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 ADGRL4Q9HBW9 690 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 TNFRSF10DQ9UBN6 386 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 RASD1Q9Y272 281 aa18.59■□□□□ 0.57
PNKP-203ENST00000593946 PRRC2CQ9Y520 2896 aaKnown RBP18.58■□□□□ 0.57
PNKP-203ENST00000593946 A6NIZ1 184 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 K7ENP7 123 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 DCTN6O00399 190 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 ATP6V1E1P36543 226 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 ETV1P50549 477 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 RAP1BP61224 184 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 RAP1AP62834 184 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 RUNX1T1Q06455 604 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 POU4F2Q12837 409 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 SLC10A1Q14973 349 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 PON3Q15166 354 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 LINC01590Q5TEZ4 76 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 LCN1P1Q5VSP4 162 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 HBMQ6B0K9 141 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 INO80CQ6PI98 192 aaPredicted RBP18.58■□□□□ 0.57
PNKP-203ENST00000593946 GPAT4Q86UL3 456 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 PM20D2Q8IYS1 436 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 UBQLNLQ8IYU4 475 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 ZADH2Q8N4Q0 377 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 OR51L1Q8NGJ5 315 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 OR2V1Q8NHB1 315 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 TXNDC15Q96J42 360 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 TSSK2Q96PF2 358 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 NAA11Q9BSU3 229 aaPredicted RBP18.58■□□□□ 0.57
PNKP-203ENST00000593946 MED29Q9NX70 200 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 ERGIC3Q9Y282 383 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 LSM2Q9Y333 95 aaKnown RBP18.58■□□□□ 0.57
PNKP-203ENST00000593946 EXOSC1Q9Y3B2 195 aaKnown RBP18.58■□□□□ 0.57
PNKP-203ENST00000593946 CEPT1Q9Y6K0 416 aa18.58■□□□□ 0.57
PNKP-203ENST00000593946 CACNA1AO00555 2505 aa18.58■□□□□ 0.56
PNKP-203ENST00000593946 GLCEO94923 617 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 SBK2P0C263 348 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 MYL12AP19105 171 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 CARD18P57730 90 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 WDFY1Q8IWB7 410 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 OR6V1Q8N148 313 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 NANOGP1Q8N7R0 232 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 PROKR2Q8NFJ6 384 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 OR2T4Q8NH00 348 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 ZMYND19Q96E35 227 aaPredicted RBP18.57■□□□□ 0.56
PNKP-203ENST00000593946 ZHX1-C8orf76Q96EF9 292 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 UCN2Q96RP3 112 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 MND1Q9BWT6 205 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 MOKQ9UQ07 419 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 SLC22A23A1A5C7 686 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 VGLL3A8MV65 326 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 H3BSA7 217 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 VAMP5O95183 116 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 LIMS3P0CW19 117 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 LIMS4P0CW20 117 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 PSMB9P28065 219 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 PYCR1P32322 319 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 CLDN18P56856 261 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 PMP22Q01453 160 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 POU4F3Q15319 338 aa18.57■□□□□ 0.56
PNKP-203ENST00000593946 EEF1A1P5Q5VTE0 462 aa18.57■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms