RNA–Protein interactions for RNA: ENST00000590301.1

NPC1-208, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 410 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-208ENST00000590301 OR5J2Q8NH18 312 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 SPATA3Q8NHX4 192 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 MCHR1Q99705 422 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 ARHGDIGQ99819 225 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 PIMREGQ9BSJ6 248 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 RSPO3Q9BXY4 272 aaPredicted RBP6.6□□□□□ -1.35
NPC1-208ENST00000590301 ULBP2Q9BZM5 246 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 POLR2J2Q9GZM3 115 aaKnown RBP6.6□□□□□ -1.35
NPC1-208ENST00000590301 RAB1BQ9H0U4 201 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 PCDHAC1Q9H158 963 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 POLR2J3Q9H1A7 115 aaKnown RBP6.6□□□□□ -1.35
NPC1-208ENST00000590301 PLK3Q9H4B4 646 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 KAT8Q9H7Z6 458 aaKnown RBP6.6□□□□□ -1.35
NPC1-208ENST00000590301 SEC14L4Q9UDX3 406 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 POFUT2Q9Y2G5 429 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 SPEF1Q9Y4P9 236 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 HEATR5AQ86XA9 2040 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 USF3Q68DE3 2245 aa6.6□□□□□ -1.35
NPC1-208ENST00000590301 IGHV2OR16-5A0A0B4J2B6 119 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 SLC35F4A4IF30 521 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 TRAPPC13A5PLN9 417 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 KIAA1324LA8MWY0 1029 aaPredicted RBP6.59□□□□□ -1.35
NPC1-208ENST00000590301 VWC2LB2RUY7 222 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 MS4A18H0YCH9 400 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 M0QX08 132 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 M0R3G1 203 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 MGRN1O60291 552 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 TPST2O60704 377 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 HPRP00739 348 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 IGF2P01344 180 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 IFNA14P01570 189 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 HIST1H2ABP04908 130 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 FAM157CP0CG43 387 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 TROVE2P10155 538 aaKnown RBP eCLIP6.59□□□□□ -1.35
NPC1-208ENST00000590301 NPR2P20594 1047 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 LSP1P33241 339 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 THBS2P35442 1172 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 NR4A2P43354 598 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 CAPZA2P47755 286 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 CSNK1A1P48729 337 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 EVX1P49640 407 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 MTPNP58546 118 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 RPS23P62266 143 aaKnown RBP6.59□□□□□ -1.35
NPC1-208ENST00000590301 HGFACQ04756 655 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 ZP4Q12836 540 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 MAPRE2Q15555 327 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 DUSP7Q16829 419 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 GSG1Q2KHT4 349 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 TRMT5Q32P41 509 aaKnown RBP6.59□□□□□ -1.35
NPC1-208ENST00000590301 MS4A18Q3C1V0 323 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 TTC33Q6PID6 262 aaPredicted RBP6.59□□□□□ -1.35
NPC1-208ENST00000590301 UGT2A3Q6UWM9 527 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 NHLRC1Q6VVB1 395 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 CCDC80Q76M96 950 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 HIST3H2AQ7L7L0 130 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 PIWIL3Q7Z3Z3 882 aaKnown RBP6.59□□□□□ -1.35
NPC1-208ENST00000590301 HDDC2Q7Z4H3 204 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 DPPA2Q7Z7J5 298 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 SMYD1Q8NB12 490 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 OR8J3Q8NGG0 315 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 OR6N1Q8NGY5 312 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 OR6X1Q8NH79 312 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 SLC26A7Q8TE54 656 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 NEU4Q8WWR8 484 aaPredicted RBP6.59□□□□□ -1.35
NPC1-208ENST00000590301 HIST1H2ACQ93077 130 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 MOGAT1Q96PD6 335 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 SORCS2Q96PQ0 1159 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 VRK1Q99986 396 aaPredicted RBP6.59□□□□□ -1.35
NPC1-208ENST00000590301 ZNF426Q9BUY5 554 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 B3GNT2Q9NY97 397 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 ZNF229Q9UJW7 825 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 ADAM21Q9UKJ8 722 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 BAG5Q9UL15 447 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 DNHD1Q96M86 4753 aa6.59□□□□□ -1.35
NPC1-208ENST00000590301 FBN1P35555 2871 aaKnown RBP6.58□□□□□ -1.36
NPC1-208ENST00000590301 A0A0G2JND7 137 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 HTR3EA5X5Y0 456 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 BBIP1A8MTZ0 92 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 CENPBD1B2RD01 187 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 hCG_2039718K7EN88 272 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 M0R3H8 397 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 GPRIN2O60269 458 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 UBL3O95164 117 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 RAB36O95755 333 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 HLA-HP01893 362 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 ADORA3P0DMS8 318 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 THRBP10828 461 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 CD79AP11912 226 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 HLA-DOBP13765 273 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 HNF1AP20823 631 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 CD247P20963 164 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 CBLP22681 906 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 NR4A1P22736 598 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 AHCYP23526 432 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 GIFP27352 417 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 CALCRP30988 508 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 THBS4P35443 961 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 RBM34P42696 430 aaKnown RBP6.58□□□□□ -1.36
NPC1-208ENST00000590301 TUBA1BP68363 451 aa6.58□□□□□ -1.36
NPC1-208ENST00000590301 TUBA4AP68366 448 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms