RNA–Protein interactions for RNA: ENST00000557026.5

NEK9-210, Transcript of NIMA related kinase 9, humanhuman

TSL 2

Gene NEK9, Length 5,177 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-210ENST00000557026 SSC5DA1L4H1 1573 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 SH2D1BO14796 132 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 PRAMEF4O60810 478 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 PIAS2O75928 621 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 HTR2CP28335 458 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 LHFPL2Q6ZUX7 228 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 TP53INP2Q8IXH6 220 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 RAB3CQ96E17 227 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 S1PR3Q99500 378 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 ARL6Q9H0F7 186 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 FAM96BQ9Y3D0 163 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 CACNG2Q9Y698 323 aa11.02□□□□□ -0.65
NEK9-210ENST00000557026 COL22A1Q8NFW1 1626 aaPredicted RBP11.01□□□□□ -0.65
NEK9-210ENST00000557026 C21orf140B9A014 251 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 LYRM1O43325 122 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 GPX2P18283 190 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 FZD2Q14332 565 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 AADACL3Q5VUY0 350 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 BTLAQ7Z6A9 289 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 Q8IYB0 196 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 CYB561A3Q8NBI2 242 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 TRMT61AQ96FX7 289 aaKnown RBP11.01□□□□□ -0.65
NEK9-210ENST00000557026 C4orf36Q96KX1 117 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 ST6GALNAC5Q9BVH7 336 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 C1QTNF3Q9BXJ4 246 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 SHARPINQ9H0F6 387 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 SCPEP1Q9HB40 452 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 DUSP13Q9UII6 198 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 TJP1Q07157 1748 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 HSBP1L1C9JCN9 74 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 HYAL1Q12794 435 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 HTR4Q13639 388 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 TRAT1Q6PIZ9 186 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 BCL2L10Q9HD36 194 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 PHIPQ8WWQ0 1821 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 SLC22A20A6NK97 555 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 CLDN24A6NM45 220 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 CRYBA1P05813 215 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 SLC19A1P41440 591 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 PCBP4P57723 403 aaKnown RBP11.01□□□□□ -0.65
NEK9-210ENST00000557026 LTBQ06643 244 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 DUSP8Q13202 625 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 SNTB1Q13884 538 aaKnown RBP11.01□□□□□ -0.65
NEK9-210ENST00000557026 ETFBKMTQ8IXQ9 262 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 PGBD5Q8N414 524 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 SLC38A5Q8WUX1 472 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 LHPPQ9H008 270 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 DFFBO76075 338 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 BCKDHBP21953 392 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 PEA15Q15121 130 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 RTL8BQ17RB0 113 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 LEXMQ3ZCV2 418 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 NUFIP2Q7Z417 695 aaKnown RBP11.01□□□□□ -0.65
NEK9-210ENST00000557026 RBMXL3Q8N7X1 1067 aaKnown RBP11.01□□□□□ -0.65
NEK9-210ENST00000557026 OR9Q2Q8NGE9 314 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 OR2V1Q8NHB1 315 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 DMRTB1Q96MA1 342 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 PTGDR2Q9Y5Y4 395 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 MYH6P13533 1939 aa11.01□□□□□ -0.65
NEK9-210ENST00000557026 NPIPA5A0A0B4J1W7 369 aa11□□□□□ -0.65
NEK9-210ENST00000557026 SH2D7A6NKC9 451 aaPredicted RBP11□□□□□ -0.65
NEK9-210ENST00000557026 MSTNO14793 375 aa11□□□□□ -0.65
NEK9-210ENST00000557026 SERPINA2P20848 420 aa11□□□□□ -0.65
NEK9-210ENST00000557026 FAM111BQ6SJ93 734 aa11□□□□□ -0.65
NEK9-210ENST00000557026 OR6V1Q8N148 313 aa11□□□□□ -0.65
NEK9-210ENST00000557026 C12orf45Q8N5I9 185 aaPredicted RBP11□□□□□ -0.65
NEK9-210ENST00000557026 EDARADDQ8WWZ3 215 aa11□□□□□ -0.65
NEK9-210ENST00000557026 ELMOD3Q96FG2 381 aa11□□□□□ -0.65
NEK9-210ENST00000557026 PSD2Q9BQI7 771 aa11□□□□□ -0.65
NEK9-210ENST00000557026 LUZP4Q9P127 313 aa11□□□□□ -0.65
NEK9-210ENST00000557026 ACTL7AQ9Y615 435 aa11□□□□□ -0.65
NEK9-210ENST00000557026 KNG1P01042 644 aa11□□□□□ -0.65
NEK9-210ENST00000557026 ARRB2P32121 409 aa11□□□□□ -0.65
NEK9-210ENST00000557026 HOXA1P49639 335 aaPredicted RBP11□□□□□ -0.65
NEK9-210ENST00000557026 VEGFCP49767 419 aa11□□□□□ -0.65
NEK9-210ENST00000557026 TOMM34Q15785 309 aaPredicted RBP11□□□□□ -0.65
NEK9-210ENST00000557026 CYP4V2Q6ZWL3 525 aaPredicted RBP11□□□□□ -0.65
NEK9-210ENST00000557026 PRSS35Q8N3Z0 413 aa11□□□□□ -0.65
NEK9-210ENST00000557026 KISS1RQ969F8 398 aaPredicted RBP11□□□□□ -0.65
NEK9-210ENST00000557026 NECAP2Q9NVZ3 263 aa11□□□□□ -0.65
NEK9-210ENST00000557026 ARPC4-TTLL3A0A0A6YYG9 625 aa11□□□□□ -0.65
NEK9-210ENST00000557026 CCDC163A0A0D9SF12 145 aa11□□□□□ -0.65
NEK9-210ENST00000557026 TVP23AA6NH52 213 aa11□□□□□ -0.65
NEK9-210ENST00000557026 PFN3P60673 137 aa11□□□□□ -0.65
NEK9-210ENST00000557026 CXADRP78310 365 aa11□□□□□ -0.65
NEK9-210ENST00000557026 ZNF616Q08AN1 781 aa11□□□□□ -0.65
NEK9-210ENST00000557026 HAGHLQ6PII5 290 aaPredicted RBP11□□□□□ -0.65
NEK9-210ENST00000557026 PRICKLE2Q7Z3G6 844 aa11□□□□□ -0.65
NEK9-210ENST00000557026 OR4D9Q8NGE8 314 aa11□□□□□ -0.65
NEK9-210ENST00000557026 H1FXQ92522 213 aaKnown RBP11□□□□□ -0.65
NEK9-210ENST00000557026 EHFQ9NZC4 300 aa11□□□□□ -0.65
NEK9-210ENST00000557026 VSX1Q9NZR4 365 aaPredicted RBP11□□□□□ -0.65
NEK9-210ENST00000557026 NDUFAF4Q9P032 175 aa11□□□□□ -0.65
NEK9-210ENST00000557026 TBC1D29Q9UFV1 150 aa11□□□□□ -0.65
NEK9-210ENST00000557026 DIMT1Q9UNQ2 313 aaKnown RBP11□□□□□ -0.65
NEK9-210ENST00000557026 GPR52Q9Y2T5 361 aa11□□□□□ -0.65
NEK9-210ENST00000557026 PCDHGA1Q9Y5H4 931 aa11□□□□□ -0.65
NEK9-210ENST00000557026 TRBV5-4A0A0C4DH59 114 aa11□□□□□ -0.65
NEK9-210ENST00000557026 C5orf67F2Z3F1 127 aa11□□□□□ -0.65
NEK9-210ENST00000557026 RAB5BP61020 215 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 238.9 ms