RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ICAM2P13598 275 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 MAOBP27338 520 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 DRD3P35462 400 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 EFNB2P52799 333 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 Q499Y3 187 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 TMEM52BQ4KMG9 183 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 PRAMEF8Q5VWM4 474 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 PRAMEF7Q5VXH5 474 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 PWWP2BQ6NUJ5 590 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 FBXO42Q6P3S6 717 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 ULK3Q6PHR2 472 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 OVCH1Q7RTY7 1134 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 SLC35F3Q8IY50 421 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 ZFP82Q8N141 532 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 ACBD4Q8NC06 268 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 STEAP2Q8NFT2 490 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 OR4C3Q8NH37 302 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 FAM3CQ92520 227 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 RAB7BQ96AH8 199 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 POFUT1Q9H488 388 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 PNO1Q9NRX1 252 aaKnown RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 SLC22A13Q9Y226 551 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 PCDHGA9Q9Y5G4 932 aaKnown RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 ANAPC1Q9H1A4 1944 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 ARHGEF17Q96PE2 2063 aaPredicted RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 TRAV1-2A0A0B4J238 106 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 ADAM11O75078 769 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 FARS2O95363 451 aaKnown RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 FGF19O95750 216 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 IFNA6P05013 189 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 APODP05090 189 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 VSIG10L2P0DP72 767 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 ARFIP1P53367 373 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 H2BFSP57053 126 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 FAM53BQ14153 422 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 SEZ6L2Q6UXD5 910 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 KDM8Q8N371 416 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 LHFPL5Q8TAF8 219 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 C2CD4CQ8TF44 421 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 COX14Q96I36 57 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 ZFYVE21Q9BQ24 234 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 ZNF350Q9GZX5 532 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 SOHLH2Q9NX45 425 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 CKLFQ9UBR5 152 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 C19orf53Q9UNZ5 99 aaPredicted RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 FOXJ3Q9UPW0 622 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 TRAV8-7A0A075B6U6 113 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 FKTNO75072 461 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 SLC25A12O75746 678 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 APBB3O95704 486 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 HLA-AP01891 365 aaKnown RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 ZP3P21754 424 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 DIO1P49895 249 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 RPS21P63220 83 aaKnown RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 EIF2B1Q14232 305 aaKnown RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 FAM199XQ6PEV8 388 aaPredicted RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 TMPRSS11FQ6ZWK6 438 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 TAF8Q7Z7C8 310 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 C12orf45Q8N5I9 185 aaPredicted RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 POMGNT2Q8NAT1 580 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 INO80EQ8NBZ0 244 aaPredicted RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 PAQR8Q8TEZ7 354 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 SLC22A18Q96BI1 424 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 RADILQ96JH8 1075 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 ZNF75AQ96N20 296 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 PITHD1Q9GZP4 211 aaPredicted RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.62□□□□□ -0.55
VPS52-218ENST00000482399 ACTR10Q9NZ32 417 aa11.62□□□□□ -0.55
VPS52-218ENST00000482399 COL4A4P53420 1690 aaPredicted RBP11.61□□□□□ -0.55
VPS52-218ENST00000482399 KLF4O43474 513 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 FADS1O60427 444 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 TGM6O95932 706 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 MYOGP15173 224 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 MAPK3P27361 379 aaPredicted RBP11.61□□□□□ -0.55
VPS52-218ENST00000482399 OR7A5Q15622 319 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 ZIC1Q15915 447 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 STEAP1BQ6NZ63 245 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 PXKQ7Z7A4 578 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 GPAT4Q86UL3 456 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 OR2L13Q8N349 312 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 PXT1Q8NFP0 134 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 OR1E3Q8WZA6 343 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 SLC38A3Q99624 504 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 WDR76Q9H967 626 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 ZNF223Q9UK11 482 aaPredicted RBP11.61□□□□□ -0.55
VPS52-218ENST00000482399 D6RAR5 112 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 HCRTR2O43614 444 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 PRAMEF2O60811 474 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 THBS1P07996 1170 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 CD34P28906 385 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 PPP1CAP62136 330 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 GPR18Q14330 331 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 STPG1Q5TH74 334 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 TANGO2Q6ICL3 276 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 OR4S1Q8NGB4 309 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 GPR148Q8TDV2 347 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 METTL21AQ8WXB1 218 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 MENTQ9BUN1 341 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 ELOVL3Q9HB03 270 aa11.61□□□□□ -0.55
VPS52-218ENST00000482399 BRWD1Q9NSI6 2320 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms