RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 IER3IP1Q9Y5U9 82 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 ZNF780BQ9Y6R6 833 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 C5orf42Q9H799 3197 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 RAB19A4D1S5 217 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 GPRIN2O60269 458 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 CLEC3AO75596 197 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 FBXO45P0C2W1 286 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 PNLIPRP2P54317 469 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 C11orf87Q6NUJ2 197 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 RNF113BQ8IZP6 322 aaKnown RBP12.56□□□□□ -0.4
NPHP4-207ENST00000470763 OR51D1Q8NGF3 324 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 TCEAL3Q969E4 200 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 NMNAT3Q96T66 252 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 GAREM1Q9H706 876 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 KCNE5Q9UJ90 142 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 PLEKHA6Q9Y2H5 1048 aa12.56□□□□□ -0.4
NPHP4-207ENST00000470763 TRAV8-7A0A075B6U6 113 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 TMEM82A0PJX8 343 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ZNF705EA8MWA4 302 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-207ENST00000470763 XRCC3O43542 346 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ICOSLGO75144 302 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 S100A9P06702 114 aaKnown RBP12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ARFIP1P53367 373 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ARHGAP11AQ6P4F7 1023 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 FAM122BQ7Z309 247 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 OR5K2Q8NHB8 316 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 PPP1R1CQ8WVI7 109 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 PTCHD1Q96NR3 888 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 SLITRK2Q9H156 845 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 EPHA6Q9UF33 1036 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 STEAP1Q9UHE8 339 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 KLF15Q9UIH9 416 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 NOP16Q9Y3C1 178 aaKnown RBP12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ARID1AO14497 2285 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 GGT3PA6NGU5 568 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 NGFRP08138 427 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 OR8G3PP0DMU2 310 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 NR0B1P51843 470 aaKnown RBP12.55□□□□□ -0.4
NPHP4-207ENST00000470763 CAPZA1P52907 286 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 RBM39Q14498 530 aaKnown RBP12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ZNF234Q14588 700 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 PON3Q15166 354 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 EIPR1Q53HC9 387 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 STEAP1BQ6NZ63 245 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ABHD17CQ6PCB6 329 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ZNF704Q6ZNC4 412 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-207ENST00000470763 BIVMQ86UB2 503 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 FGF13Q92913 245 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ZNF681Q96N22 645 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 SDF2Q99470 211 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 TRPV4Q9HBA0 871 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 NOSIPQ9Y314 301 aaKnown RBP12.55□□□□□ -0.4
NPHP4-207ENST00000470763 FAM96BQ9Y3D0 163 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 SCAMP1O15126 338 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 OR2F2O95006 317 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 SNAPINO95295 136 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 CSN2P05814 226 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 SLC6A6P31641 620 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 OR2F1Q13607 317 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 AMZ2Q86W34 360 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 GTPBP8Q8N3Z3 284 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-207ENST00000470763 CDX2Q99626 313 aaPredicted RBP12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ZNF251Q9BRH9 671 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 MENTQ9BUN1 341 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 ICAM5Q9UMF0 924 aa12.55□□□□□ -0.4
NPHP4-207ENST00000470763 LOC100509620A0A075B734 347 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 DUXAA6NLW8 204 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 C4orf47A7E2U8 309 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 MCIDASD6RGH6 385 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 EPCAMP16422 314 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 CASRP41180 1078 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 HABP2Q14520 560 aaPredicted RBP12.54□□□□□ -0.4
NPHP4-207ENST00000470763 NKAIN2Q5VXU1 208 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 FIGNL1Q6PIW4 674 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 POMGNT2Q8NAT1 580 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 ZSCAN1Q8NBB4 408 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 DMBX1Q8NFW5 382 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 OR5M8Q8NGP6 311 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 OR10AC1Q8NH08 325 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 PHOSPHO1Q8TCT1 267 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 PITHD1Q9GZP4 211 aaPredicted RBP12.54□□□□□ -0.4
NPHP4-207ENST00000470763 CAPN10Q9HC96 672 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 ADAP2Q9NPF8 381 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 MYO9BQ13459 2157 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 C17orf113A0A1B0GUU1 675 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 SPINT1O43278 529 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 LATO43561 262 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 EIF1BO60739 113 aaKnown RBP12.54□□□□□ -0.4
NPHP4-207ENST00000470763 PMS2P2O95744 297 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 RD3LP0DJH9 198 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 EIF1P41567 113 aaKnown RBP12.54□□□□□ -0.4
NPHP4-207ENST00000470763 SNRPNP63162 240 aaKnown RBP12.54□□□□□ -0.4
NPHP4-207ENST00000470763 ID2Q02363 134 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 NR0B2Q15466 257 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 DNM1P46Q6ZS02 220 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 OR4A4PQ8NGN8 299 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 C15orf40Q8WUR7 153 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 NXPE3Q969Y0 559 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 IGSF21Q96ID5 467 aa12.54□□□□□ -0.4
NPHP4-207ENST00000470763 TAS2R8Q9NYW2 309 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms