RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 DEFB113Q30KQ7 82 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 FGD3Q5JSP0 725 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 ANKRD16Q6P6B7 361 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 KLHL17Q6TDP4 642 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 TMEM108Q6UXF1 575 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 RINLQ6ZS11 566 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 TRPM8Q7Z2W7 1104 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 C20orf196Q8IYI0 205 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 ARHGAP24Q8N264 748 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 NOXO1Q8NFA2 376 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 ASB10Q8WXI3 467 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 AKAP1Q92667 903 aaKnown RBP eCLIP11.29□□□□□ -0.6
COL5A1-206ENST00000465877 NEUROG1Q92886 237 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 FBXW5Q969U6 566 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 ZNF837Q96EG3 531 aaPredicted RBP11.29□□□□□ -0.6
COL5A1-206ENST00000465877 C7orf34Q96L11 122 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 LRR1Q96L50 414 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 ULBP2Q9BZM5 246 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 CXXC4Q9H2H0 198 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 OBP2BQ9NPH6 170 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 HIF3AQ9Y2N7 669 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 F8P00451 2351 aa11.29□□□□□ -0.6
COL5A1-206ENST00000465877 ALPK2Q86TB3 2170 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 A0A087WUU8 490 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 A0A096LPE4 126 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 ARPC4-TTLL3A0A0A6YYG9 625 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 A0A1W2PPZ6 126 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 HTR3EA5X5Y0 456 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 ZNF99A8MXY4 864 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 MCIDASD6RGH6 385 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 PDE5AO76074 875 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 DIRAS1O95057 198 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 WNT11O96014 354 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 F13BP05160 661 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 H1F0P07305 194 aaKnown RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 PGA4P0DJD7 388 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 PGA3P0DJD8 388 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 RHCEP18577 417 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 MAKP20794 623 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 PTAFRP25105 342 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 CD40P25942 277 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 AQP2P41181 271 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 GPR4P46093 362 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 DAP3P51398 398 aaKnown RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 PRPS1P60891 318 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 UBE2NP61088 152 aaKnown RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 TUBA1BP68363 451 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 TUBA4AP68366 448 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 PRKCDQ05655 676 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 ZNF672Q499Z4 452 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 C1QTNF12Q5T7M4 302 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 ZNF730Q6ZMV8 503 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 MBOAT2Q6ZWT7 520 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 TUBA1AQ71U36 451 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 MEX3DQ86XN8 651 aaKnown RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 PIAS4Q8N2W9 510 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 ZNF611Q8N823 705 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 OR6N1Q8NGY5 312 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 OR6X1Q8NH79 312 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 LILRB1Q8NHL6 650 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 MOSPD2Q8NHP6 518 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 SLC7A13Q8TCU3 470 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 MAGEE2Q8TD90 523 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 ZNF566Q969W8 418 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 SLC25A44Q96H78 314 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 PYURFQ96I23 114 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 NMNAT1Q9HAN9 279 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 INIPQ9NRY2 104 aa11.28□□□□□ -0.6
COL5A1-206ENST00000465877 BEX4Q9NWD9 120 aaPredicted RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 PRPF19Q9UMS4 504 aaKnown RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 FAM32AQ9Y421 112 aaKnown RBP11.28□□□□□ -0.6
COL5A1-206ENST00000465877 TRAV27A0A087WT01 109 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 A0A1W2PRG6 482 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 A0A1W2PRQ8 180 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 NPIPB13A6NJU9 1138 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 EFCAB9A8MZ26 197 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 SHISA9B4DS77 424 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 NPIPB4C9JG80 1138 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 UBOX5O94941 541 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 IGHG1P01857 330 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 ITGA2P17301 1181 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 SLC9A3P48764 834 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 ARF1P84077 181 aaKnown RBP11.27□□□□□ -0.61
COL5A1-206ENST00000465877 SPIBQ01892 262 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 DGCR6Q14129 220 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 ALG10Q5BKT4 473 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 MTX3Q5HYI7 312 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 LCN8Q6JVE9 175 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 CYP2R1Q6VVX0 501 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 SPNS3Q6ZMD2 512 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 HDDC2Q7Z4H3 204 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 RNF113BQ8IZP6 322 aaKnown RBP11.27□□□□□ -0.61
COL5A1-206ENST00000465877 OR13C2Q8NGS9 318 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 BCL2L2Q92843 193 aaPredicted RBP11.27□□□□□ -0.61
COL5A1-206ENST00000465877 TMEM54Q969K7 222 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 PIGTQ969N2 578 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 CCDC124Q96CT7 223 aaKnown RBP11.27□□□□□ -0.61
COL5A1-206ENST00000465877 DHRS1Q96LJ7 313 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 PIP5K1AQ99755 562 aa11.27□□□□□ -0.61
COL5A1-206ENST00000465877 C1QTNF6Q9BXI9 259 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms