RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 HDDC2Q7Z4H3 204 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 CCDC36Q8IYA8 594 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 C20orf196Q8IYI0 205 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 RNF113BQ8IZP6 322 aaKnown RBP13.09□□□□□ -0.31
ATG4B-213ENST00000460211 TMEM123Q8N131 208 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 OR6X1Q8NH79 312 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 PFN4Q8NHR9 129 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 MAGEE2Q8TD90 523 aaPredicted RBP13.09□□□□□ -0.31
ATG4B-213ENST00000460211 TMEM171Q8WVE6 324 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 FBXW5Q969U6 566 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 C18orf12Q96KH6 178 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 C1QTNF6Q9BXI9 259 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 CXorf56Q9H5V9 222 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 CRLF2Q9HC73 371 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 FAM53CQ9NYF3 392 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 RHCGQ9UBD6 479 aa13.09□□□□□ -0.31
ATG4B-213ENST00000460211 NSD1Q96L73 2696 aaPredicted RBP13.08□□□□□ -0.31
ATG4B-213ENST00000460211 ARHGEF9O43307 516 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 INHBBP09529 407 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 IFI30P13284 250 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ITGA2P17301 1181 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 CALB2P22676 271 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 CD40P25942 277 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 CSNK1A1P48729 337 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 BIDP55957 195 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ARF1P84077 181 aaKnown RBP13.08□□□□□ -0.32
ATG4B-213ENST00000460211 CAMK2DQ13557 499 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ZNF672Q499Z4 452 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-213ENST00000460211 HIKESHIQ53FT3 197 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 SLC22A25Q6T423 547 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ZNF730Q6ZMV8 503 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 LINGO2Q7L985 606 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 SLC46A3Q7Z3Q1 461 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ARHGAP24Q8N264 748 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 PIAS4Q8N2W9 510 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-213ENST00000460211 LIPHQ8WWY8 451 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 BCL2L2Q92843 193 aaPredicted RBP13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ZNF566Q969W8 418 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 MCUR1Q96AQ8 359 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 BPIFA2Q96DR5 249 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 NSMCE2Q96MF7 247 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 KCNS3Q9BQ31 491 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ULBP2Q9BZM5 246 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ANKRD19PQ9H560 264 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 C20orf141Q9NUB4 165 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 FAIMQ9NVQ4 179 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 NPAP1Q9NZP6 1156 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 STX18Q9P2W9 335 aaKnown RBP13.08□□□□□ -0.32
ATG4B-213ENST00000460211 CD300AQ9UGN4 299 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 POU2F3Q9UKI9 436 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 POFUT2Q9Y2G5 429 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 SNX13Q9Y5W8 968 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ENPP4Q9Y6X5 453 aa13.08□□□□□ -0.32
ATG4B-213ENST00000460211 ALPK2Q86TB3 2170 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 CADP27708 2225 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 A0A096LPE4 126 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 A0A1W2PPZ6 126 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 ZNF99A8MXY4 864 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-213ENST00000460211 MCIDASD6RGH6 385 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 J3KTA2 159 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 ENTPD5O75356 428 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 RHCEP18577 417 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 DAP3P51398 398 aaKnown RBP13.07□□□□□ -0.32
ATG4B-213ENST00000460211 RPL18Q07020 188 aaKnown RBP13.07□□□□□ -0.32
ATG4B-213ENST00000460211 FXNQ16595 210 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 NHLRC1Q6VVB1 395 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 FAM156AQ8NDB6 213 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 KBTBD8Q8NFY9 601 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 BCAS4Q8TDM0 211 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 SMAP2Q8WU79 429 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-213ENST00000460211 ACOT11Q8WXI4 607 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-213ENST00000460211 SLC25A44Q96H78 314 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-213ENST00000460211 PYURFQ96I23 114 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 NMNAT1Q9HAN9 279 aaPredicted RBP13.07□□□□□ -0.32
ATG4B-213ENST00000460211 INIPQ9NRY2 104 aa13.07□□□□□ -0.32
ATG4B-213ENST00000460211 CISD1Q9NZ45 108 aaKnown RBP13.07□□□□□ -0.32
ATG4B-213ENST00000460211 ARPC4-TTLL3A0A0A6YYG9 625 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 FFAR1O14842 300 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 IGHG1P01857 330 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 H1F0P07305 194 aaKnown RBP13.06□□□□□ -0.32
ATG4B-213ENST00000460211 SAGP10523 405 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-213ENST00000460211 AQP2P41181 271 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 CDH11P55287 796 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 SMIM11AP58511 58 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 ANKDD1AQ495B1 522 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 SHEQ5VZ18 495 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 NRMQ8IXM6 262 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 LRRC75A-AS1Q8N1F1 130 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 NDEL1Q9GZM8 345 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 KRCC1Q9NPI7 259 aaPredicted RBP13.06□□□□□ -0.32
ATG4B-213ENST00000460211 GLTPQ9NZD2 209 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 NDUFAF4Q9P032 175 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 LAMP3Q9UQV4 416 aa13.06□□□□□ -0.32
ATG4B-213ENST00000460211 A0A1W2PRQ8 180 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 EFCAB9A8MZ26 197 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 SHISA9B4DS77 424 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 ARPC2O15144 300 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 PIP5K1CO60331 668 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 F13BP05160 661 aa13.05□□□□□ -0.32
ATG4B-213ENST00000460211 MSX2P35548 267 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms