RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 IDSB3KWA1 339 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 H3BN98 237 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 H3BNH8 94 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PEX12O00623 359 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 TPST2O60704 377 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 CSO75390 466 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 KCNK2O95069 426 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR5F1O95221 314 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 CLIC3O95833 236 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 LGI1O95970 557 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 CYC1P08574 325 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF806P0C7X5 589 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 FGF5P12034 268 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 POU2F1P14859 743 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ATP6V1B1P15313 513 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 RPS4Y1P22090 263 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PRKACGP22612 351 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 EEF1B2P24534 225 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 GSSP48637 474 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 EMDP50402 254 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 DAPP51397 102 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 CCR4P51679 360 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 NR0B1P51843 470 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ATP12AP54707 1039 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 EMP2P54851 167 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 DLX5P56178 289 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PSPHP78330 225 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ADARB1P78563 741 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ADORA2A-AS1P86434 159 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 MYBPC1Q00872 1141 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 FAM27E3Q08E93 113 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 FUT7Q11130 342 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ILKQ13418 452 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 TRAM2Q15035 370 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZSWIM7Q19AV6 140 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 MICAQ29983 383 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC36A3Q495N2 470 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 KCTD21Q4G0X4 260 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 NHSL2Q5HYW2 709 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 RBM48Q5RL73 367 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PDZK1Q5T2W1 519 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 DCAF12Q5T6F0 453 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF691Q5VV52 312 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 FAHD1Q6P587 224 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PAPD4Q6PIY7 484 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 KLHL24Q6TFL4 600 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 UGT2A3Q6UWM9 527 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 NPSR1Q6W5P4 371 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF730Q6ZMV8 503 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 SHISA6Q6ZSJ9 500 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 LANCL3Q6ZV70 420 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF550Q7Z398 422 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ANKRD37Q7Z713 158 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 LACC1Q8IV20 430 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF440Q8IYI8 595 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC34A3Q8N130 599 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 SLC5A8Q8N695 610 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 BCORP1Q8N888 145 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF615Q8N8J6 731 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 POC1AQ8NBT0 407 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 MORN4Q8NDC4 146 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PLPP5Q8NEB5 264 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR4D11Q8NGI4 311 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR4C15Q8NGM1 316 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR6T1Q8NGN1 323 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PIGXQ8TBF5 258 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 FAM81AQ8TBF8 368 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 TEX47Q8TBZ9 253 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 GNPDA2Q8TDQ7 276 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ADAMTS16Q8TE57 1224 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 APOBEC4Q8WW27 367 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 THAP4Q8WY91 577 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 EFHD2Q96C19 240 aaPredicted RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 VMP1Q96GC9 406 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 VSTM2LQ96N03 204 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 NODALQ96S42 347 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 MBOAT4Q96T53 435 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 FEVQ99581 238 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 BARD1Q99728 777 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PSD2Q9BQI7 771 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ZNF559Q9BR84 538 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 NUDT9Q9BW91 350 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 TEX12Q9BXU0 123 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 GABARAPL3Q9BY60 117 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 MRPS26Q9BYN8 205 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PRRG3Q9BZD7 231 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 UCK2Q9BZX2 261 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 POLR2J2Q9GZM3 115 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 VN1R1Q9GZP7 353 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 HOXD1Q9GZZ0 328 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 POLR2J3Q9H1A7 115 aaKnown RBP3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ADNPQ9H2P0 1102 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 ANKRD19PQ9H560 264 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 TMEM27Q9HBJ8 222 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 FAM118AQ9NWS6 357 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 IMPAD1Q9NX62 359 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 SCN3BQ9NY72 215 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 OR6C3Q9NZP0 311 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 LUZP4Q9P127 313 aa3.42□□□□□ -1.86
HMGB3P20-201ENST00000417997 PISDQ9UG56 409 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms