RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 ADRB1P08588 477 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 CSNK1DP48730 415 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 HAGHQ16775 308 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 NAA40Q86UY6 237 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 OR5M1Q8NGP8 315 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 CPEB1Q9BZB8 566 aaKnown RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 SFXN1Q9H9B4 322 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 COL2A1P02458 1487 aaPredicted RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 CLDN1O95832 211 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 GLI4P10075 376 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 TNFRSF17Q02223 184 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 EXOSC2Q13868 293 aaKnown RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 SERTAD2Q14140 314 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 CLEC12BQ2HXU8 276 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 IAH1Q2TAA2 248 aaPredicted RBP11.14□□□□□ -0.63
UBR4-205ENST00000417040 PKDCCQ504Y2 493 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 ZNF425Q6IV72 752 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 MDGA2Q7Z553 956 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 NKAIN4Q8IVV8 208 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 PSMF1Q92530 271 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 SLC6A17Q9H1V8 727 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 FBXO8Q9NRD0 319 aa11.14□□□□□ -0.63
UBR4-205ENST00000417040 C17orf113A0A1B0GUU1 675 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 ATP1B1P05026 303 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 ITGB7P26010 798 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 ARG2P78540 354 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 MPEG1Q2M385 716 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 PDLIM3Q53GG5 364 aaPredicted RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 MRPL10Q7Z7H8 261 aaKnown RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 ANKRD9Q96BM1 317 aaPredicted RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 KCTD12Q96CX2 325 aaKnown RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 PDLIM5Q96HC4 596 aaKnown RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 ZBED3Q96IU2 234 aaPredicted RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 C12orf57Q99622 126 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 SLC2A11Q9BYW1 496 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 STRADBQ9C0K7 418 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 PLK3Q9H4B4 646 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 WDR76Q9H967 626 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 OBP2BQ9NPH6 170 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 ADAM12O43184 909 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 XRCC3O43542 346 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 IGHG1P01857 330 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 ZNF728P0DKX0 622 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 KITLGP21583 273 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 GDF1P27539 372 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 ARL6IP1Q15041 203 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 BAK1Q16611 211 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 NPSR1Q6W5P4 371 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 TCEAL8Q8IYN2 117 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 CHTF18Q8WVB6 975 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 CASD1Q96PB1 797 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 A4GALTQ9NPC4 353 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 TRAPPC2LQ9UL33 140 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 FBXO7Q9Y3I1 522 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 G3V3Y1 287 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 HNRNPA2B1P22626 353 aaKnown RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 HTR5AP47898 357 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 PFN3P60673 137 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 HABP2Q14520 560 aaPredicted RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 HMGN3Q15651 99 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 SAXO2Q658L1 398 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 OR5K2Q8NHB8 316 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 LOC100289279A0A1B0GTE1 492 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 POU3F2P20265 443 aaPredicted RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 ATP1B3P54709 279 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 UBE2IP63279 158 aaKnown RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 FAM185AQ8N0U4 392 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 SFT2D1Q8WV19 159 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 KIAA1143Q96AT1 154 aaPredicted RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 ORAI1Q96D31 301 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 ARNT2Q9HBZ2 717 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 FOXE1O00358 373 aaPredicted RBP11.13□□□□□ -0.63
UBR4-205ENST00000417040 AQP7O14520 342 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 AQP6Q13520 282 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 AANATQ16613 207 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 TAZQ16635 292 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 NKAIN2Q5VXU1 208 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 FAM122BQ7Z309 247 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 SHDQ96IW2 340 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 MTCH1Q9NZJ7 389 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 KIF25Q9UIL4 384 aa11.13□□□□□ -0.63
UBR4-205ENST00000417040 F10P00742 488 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 TK1P04183 234 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 HLA-FP30511 346 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 TAS2R30P59541 319 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 RAB11AP62491 216 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 MEP1BQ16820 701 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 UBQLN4Q9NRR5 601 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 D6RAR5 112 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 H0YGG7 62 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 H3BUI4 141 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 GPR137BO60478 399 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 CSF3P09919 207 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 SLC2A1P11166 492 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 PTGER4P35408 488 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 EPHA4P54764 986 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 LPAL2Q16609 132 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 SYT14P1Q58G82 188 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 DPPA2Q7Z7J5 298 aa11.12□□□□□ -0.63
UBR4-205ENST00000417040 MFSD9Q8NBP5 474 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms