RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 ATP5HO75947 161 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 CNOT4O95628 575 aaKnown RBP6.77□□□□□ -1.33
CPSF4-202ENST00000412686 STAMBPO95630 424 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 PLAUP00749 431 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 IGF2P01344 180 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 HRGP04196 525 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 TSPAN19P0C672 248 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 ITGA2P17301 1181 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 CRYGSP22914 178 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 MPGP29372 298 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 SSTR2P30874 369 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 PEX19P40855 299 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 SLC9A3P48764 834 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 IST1P53990 364 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 FXYD6P3P58550 94 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 CTXN1P60606 82 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 MYBPC1Q00872 1141 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 CHRNB3Q05901 458 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 DAZAP2Q15038 168 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-202ENST00000412686 ACKR1Q16570 336 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 CEACAM16Q2WEN9 425 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 FAM98BQ52LJ0 330 aaKnown RBP6.77□□□□□ -1.33
CPSF4-202ENST00000412686 ALG10Q5BKT4 473 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 TMPRSS11FQ6ZWK6 438 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 ASRGL1Q7L266 308 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 RRM2BQ7LG56 351 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 OAFQ86UD1 273 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 AQP12AQ8IXF9 295 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 C20orf196Q8IYI0 205 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 RNF113BQ8IZP6 322 aaKnown RBP6.77□□□□□ -1.33
CPSF4-202ENST00000412686 GPR137CQ8N3F9 429 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 WDR31Q8NA23 367 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 POMGNT2Q8NAT1 580 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 STEAP2Q8NFT2 490 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 OR1K1Q8NGR3 316 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 ASB10Q8WXI3 467 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 HDAC2Q92769 488 aaKnown RBP6.77□□□□□ -1.33
CPSF4-202ENST00000412686 UTP4Q969X6 686 aaKnown RBP6.77□□□□□ -1.33
CPSF4-202ENST00000412686 SLCO4A1Q96BD0 722 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 PIK3IP1Q96FE7 263 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 RSRC1Q96IZ7 334 aaKnown RBP6.77□□□□□ -1.33
CPSF4-202ENST00000412686 MUS81Q96NY9 551 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 TSPAN32Q96QS1 320 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 ZNF347Q96SE7 839 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 CHID1Q9BWS9 393 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 C1QTNF6Q9BXI9 259 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 LINC00470Q9BZP3 86 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 TRIM15Q9C019 465 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 CLEC4MQ9H2X3 399 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-202ENST00000412686 MAGIXQ9H6Y5 334 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 CRLF2Q9HC73 371 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 GPR35Q9HC97 309 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 INIPQ9NRY2 104 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 RASSF1Q9NS23 344 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.77□□□□□ -1.33
CPSF4-202ENST00000412686 LYVE1Q9Y5Y7 322 aa6.77□□□□□ -1.33
CPSF4-202ENST00000412686 IGKV1D-43A0A0B4J1Z2 117 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 TCRBV3S1A0A5B6 114 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 ZNF503-AS2A6NEH8 195 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 ZNF587BE7ETH6 402 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 H7C1C5 153 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 TNFRSF11BO00300 401 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 IMPA2O14732 288 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 AKAP8O43823 692 aaKnown RBP6.76□□□□□ -1.33
CPSF4-202ENST00000412686 OR10H3O60404 316 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 FKBP6O75344 327 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 TRMUO75648 421 aaKnown RBP6.76□□□□□ -1.33
CPSF4-202ENST00000412686 BCL10O95999 233 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 F12P00748 615 aaPredicted RBP6.76□□□□□ -1.33
CPSF4-202ENST00000412686 PGA4P0DJD7 388 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 PGA3P0DJD8 388 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 RAP2AP10114 183 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 PPP3CBP16298 524 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 CSNK1A1P48729 337 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 RASSF2P50749 326 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 LCN6P62502 163 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 ERVK-25P63136 954 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 ARF1P84077 181 aaKnown RBP6.76□□□□□ -1.33
CPSF4-202ENST00000412686 PRR20EP86478 221 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 PRR20CP86479 221 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 PRR20DP86480 221 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 PRR20BP86481 221 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 PRR20AP86496 221 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 FMODQ06828 376 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 SPOCK1Q08629 439 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 DBPQ10586 325 aaPredicted RBP6.76□□□□□ -1.33
CPSF4-202ENST00000412686 CCNIQ14094 377 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 TBRG1Q3YBR2 411 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 TIMM23BQ5SRD1 257 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 ARMC4Q5T2S8 1044 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 FBXW10Q5XX13 1052 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 OR2T5Q6IEZ7 315 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 HMBOX1Q6NT76 420 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 PGBD2Q6P3X8 592 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 CCDC121Q6ZUS5 278 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 TMEM179BQ7Z7N9 219 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 CDC20BQ86Y33 519 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 SYT14Q8NB59 555 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 OR6N1Q8NGY5 312 aa6.76□□□□□ -1.33
CPSF4-202ENST00000412686 OR2T29Q8NH02 315 aa6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms