RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CCL3P10147 92 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 TCEA1P23193 301 aaKnown RBP17.06■□□□□ 0.32
USP39-202ENST00000409025 ADH6P28332 368 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 TLE3Q04726 772 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 GLYR1Q49A26 553 aaPredicted RBP17.06■□□□□ 0.32
USP39-202ENST00000409025 CCDC58Q4VC31 144 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 HES3Q5TGS1 186 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 RPL22L1Q6P5R6 122 aaKnown RBP17.06■□□□□ 0.32
USP39-202ENST00000409025 ABHD4Q8TB40 342 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 ZBTB8AQ96BR9 441 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 PGLYRP3Q96LB9 341 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 C5orf34Q96MH7 638 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 B9D1Q9UPM9 204 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 A0A087WZY1 265 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 A6NIZ1 184 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 SULT1C4O75897 302 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 TNFSF8P32971 234 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 CENPAP49450 140 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 RAP1BP61224 184 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 RAP1AP62834 184 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 DNASE1L3Q13609 305 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 MELKQ14680 651 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 CDK5R1Q15078 307 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 Q6ZNX1 250 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 PLEKHG7Q6ZR37 379 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 CDC20BQ86Y33 519 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 KDM8Q8N371 416 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 GHSRQ92847 366 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 INTS14Q96SY0 518 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 SLC30A2Q9BRI3 323 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 SH2D2AQ9NP31 389 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 ACOXLQ9NUZ1 547 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 B3GALT5Q9Y2C3 310 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 CMAHPQ9Y471 501 aa17.06■□□□□ 0.32
USP39-202ENST00000409025 FRYLO94915 3013 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 SMIM30A4D0T7 59 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 NPIPA5E9PKD4 350 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 SERPINA3P01011 423 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 FKBP2P26885 142 aaKnown RBP17.05■□□□□ 0.32
USP39-202ENST00000409025 MTNR1BP49286 362 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 DAP3P51398 398 aaKnown RBP17.05■□□□□ 0.32
USP39-202ENST00000409025 BLVRAP53004 296 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 Q0VFX4 171 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 MYBPHQ13203 477 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 KCTD20Q7Z5Y7 419 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 OR5M1Q8NGP8 315 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 OR6N2Q8NGY6 317 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 SLC25A43Q8WUT9 341 aaPredicted RBP17.05■□□□□ 0.32
USP39-202ENST00000409025 SMIM19Q96E16 107 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 KLHL15Q96M94 604 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 GPR87Q9BY21 358 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 WDR76Q9H967 626 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 MARCH7Q9H992 704 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 P4HTMQ9NXG6 502 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 NPIPA1Q9UND3 350 aa17.05■□□□□ 0.32
USP39-202ENST00000409025 A0A0C4DFX4 3053 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 SLC22A23A1A5C7 686 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 NPIPB13A6NJU9 1138 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 NPIPB4C9JG80 1138 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 LOC110117498-PIK3R3F6TDL0 507 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 CD1AP06126 327 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 TACSTD2P09758 323 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 HLA-DOBP13765 273 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 EDNRAP25101 427 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 DLSTP36957 453 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 GDI2P50395 445 aaKnown RBP17.04■□□□□ 0.32
USP39-202ENST00000409025 IFITM3Q01628 133 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 SELENBP1Q13228 472 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 TRIP6Q15654 476 aaKnown RBP17.04■□□□□ 0.32
USP39-202ENST00000409025 FAM220AQ7Z4H9 259 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 CEACAM19Q7Z692 300 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 SNX29P2Q8IUI4 249 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 EGFL6Q8IUX8 553 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 NLGN4YQ8NFZ3 816 aaPredicted RBP17.04■□□□□ 0.32
USP39-202ENST00000409025 CHPT1Q8WUD6 406 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 SGCZQ96LD1 299 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 WDFY2Q96P53 400 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 CCDC86Q9H6F5 360 aaKnown RBP17.04■□□□□ 0.32
USP39-202ENST00000409025 LAMP5Q9UJQ1 280 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 TMEM14AQ9Y6G1 99 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 SDK2Q58EX2 2172 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 hCG_2014768A0A024R1R8 64 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 TRBV2A0A0J9YWF9 115 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 SHISA3A0PJX4 238 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 C21orf140B9A014 251 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 SNPHO15079 494 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 SLC16A7O60669 478 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 UPK1BO75841 260 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 AKR7A3O95154 331 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 SERPINA7P05543 415 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 CAV3P56539 151 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 ATP1A4Q13733 1029 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 CSRP2Q16527 193 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 ZNF684Q5T5D7 378 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 FAM205BPQ63HN1 556 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 CENPSQ8N2Z9 138 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 OR1J4Q8NGS1 313 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 ASB10Q8WXI3 467 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 NTNG2Q96CW9 530 aa17.04■□□□□ 0.32
USP39-202ENST00000409025 PROK2Q9HC23 129 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms