RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 POU3F4P49335 361 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ASTLQ6HA08 431 aaPredicted RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 SVBPQ8N300 66 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 C17orf78Q8N4C9 275 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 OR10AC1Q8NH08 325 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ELP5Q8TE02 316 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 TOMM40LQ969M1 308 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 TSACCQ96A04 125 aaPredicted RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 SLC25A28Q96A46 364 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 KIAA1143Q96AT1 154 aaPredicted RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 S100A13Q99584 98 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ST6GALNAC5Q9BVH7 336 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 SLC6A17Q9H1V8 727 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 GRHPRQ9UBQ7 328 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 FBXL21Q9UKT6 434 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ZNF175Q9Y473 711 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 HCFC2Q9Y5Z7 792 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 TEX13DA0A0J9YY54 714 aaPredicted RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 SULT1C2O00338 296 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 B3GALT2O43825 422 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 LATS1O95835 1130 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 OR13C7P0DN81 318 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 SLC2A1P11166 492 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 HIST1H1TP22492 207 aaPredicted RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 OMGP23515 440 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 CMPK1P30085 196 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 TAS2R43P59537 309 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 TAS2R20P59543 309 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 DUSP2Q05923 314 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 UBXN2BQ14CS0 331 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 RBMS3Q6XE24 437 aaKnown RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 COX15Q7KZN9 410 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 RAB11FIP2Q7L804 512 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ADGRG3Q86Y34 549 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 MISPQ8IVT2 679 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 OR14K1Q8NGZ2 314 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 SORCS2Q96PQ0 1159 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 PRO1933Q9H354 126 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.1□□□□□ -1.111e-7■■□□□ 12.1
RTN4-206ENST00000394611 SLC22A13Q9Y226 551 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 C2orf74A8MZ97 194 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 SGK494L7N484 410 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 ABLIM3O94929 683 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 IGFBP4P22692 258 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 BDKRB2P30411 391 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 C2orf68Q2NKX9 166 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 ETV3LQ6ZN32 361 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 SHISA6Q6ZSJ9 500 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 NAA40Q86UY6 237 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 LRRC25Q8N386 305 aaPredicted RBP8.09□□□□□ -1.11
RTN4-206ENST00000394611 VN1R2Q8NFZ6 395 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 OR2AK2Q8NG84 335 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 NUDCD2Q8WVJ2 157 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 SUCNR1Q9BXA5 334 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 POTEKPQ9BYX7 375 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 IFT22Q9H7X7 185 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 SPHK1Q9NYA1 384 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 UPB1Q9UBR1 384 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 PRELID3BQ9Y3B1 194 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 B3GALT1Q9Y5Z6 326 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 PTPRDP23468 1912 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 OR6C68A6NDL8 312 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 ZNF208O43345 1280 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 ADH1AP07327 375 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 ARRB1P49407 418 aaPredicted RBP8.09□□□□□ -1.11
RTN4-206ENST00000394611 ZP1P60852 638 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 ACY1Q03154 408 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 KCNC3Q14003 757 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 TOMM20Q15388 145 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 TMEM44Q2T9K0 475 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 ITPRIPL2Q3MIP1 535 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 LIPNQ5VXI9 398 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 CARD17Q5XLA6 110 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 TMEM150AQ86TG1 271 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 DEFB119Q8N690 84 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 CSNK1A1LQ8N752 337 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 PPP1R1CQ8WVI7 109 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 METTL21AQ8WXB1 218 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 MOAP1Q96BY2 351 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 SLC35A4Q96G79 324 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 MS4A8Q9BY19 250 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 C12orf10Q9HB07 376 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 EMC3Q9P0I2 261 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 DOCK9Q9BZ29 2069 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 PRAMEF27A3QJZ7 478 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 LINC00862A6NCI5 91 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 OR5H14A6NHG9 310 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 KDM4EB2RXH2 506 aaPredicted RBP8.09□□□□□ -1.11
RTN4-206ENST00000394611 SLC16A5O15375 505 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 LDOC1O95751 146 aaPredicted RBP8.09□□□□□ -1.11
RTN4-206ENST00000394611 PRNPP04156 253 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 ARG1P05089 322 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 UBBP0CG47 229 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 UBCP0CG48 685 aaKnown RBP8.09□□□□□ -1.11
RTN4-206ENST00000394611 PCSK2P16519 638 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 ARL4DP49703 201 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 NPY4RP50391 375 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 P2RX1P51575 399 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 FXYD4P59646 89 aa8.09□□□□□ -1.11
RTN4-206ENST00000394611 AVPI1Q5T686 147 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms