RNA–Protein interactions for RNA: ENST00000379792.6

HERPUD1-203, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5 BASIC

Gene HERPUD1, Length 1,782 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-203ENST00000379792 FN3KQ9H479 309 aa12.55□□□□□ -0.4
HERPUD1-203ENST00000379792 CLCF1Q9UBD9 225 aa12.55□□□□□ -0.4
HERPUD1-203ENST00000379792 SLC35F4A4IF30 521 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 TXNDC12O95881 172 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 IGHMP01871 453 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 APEHP13798 732 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 ACADSP16219 412 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 DAP3P51398 398 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 EFNB1P98172 346 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 ITGADQ13349 1161 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 IL18R1Q13478 541 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 MED21Q13503 144 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 CAMK2DQ13557 499 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 MAD2L1BPQ15013 274 aaPredicted RBP12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 ADGRE4PQ86SQ3 457 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 CPOQ8IVL8 374 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 MCEMP1Q8IX19 187 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 RPRMLQ8N4K4 120 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 SLC37A3Q8NCC5 494 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 RHOXF1Q8NHV9 184 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 SF3B5Q9BWJ5 86 aaKnown RBP12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 HCAR1Q9BXC0 346 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 CMC2Q9NRP2 79 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 DNAJC27Q9NZQ0 273 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 SH3BGRL2Q9UJC5 107 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 ZNF175Q9Y473 711 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 FLVCR1Q9Y5Y0 555 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 KIAA1549Q9HCM3 1950 aa12.54□□□□□ -0.4
HERPUD1-203ENST00000379792 SLC19A2O60779 497 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 IFNGP01579 166 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 EDN3P14138 238 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 POU4F3Q15319 338 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 SMN1Q16637 294 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 RTL6Q6ICC9 239 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 PLBD1Q6P4A8 553 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 LEG1Q6P5S2 330 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 JAZF1Q86VZ6 243 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 DOLPP1Q86YN1 238 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 TUSC5Q8IXB3 177 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 NPEPL1Q8NDH3 523 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 SETD9Q8NE22 299 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 BBS1Q8NFJ9 593 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 OR9Q1Q8NGQ5 310 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 TMEM163Q8TC26 289 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 HDAC2Q92769 488 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 PRRG3Q9BZD7 231 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 CALHM2Q9HA72 323 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 HINT3Q9NQE9 182 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 KLHL21Q9UJP4 597 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 GTF3C1Q12789 2109 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 OR6C68A6NDL8 312 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 ZNF726A6NNF4 738 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 XKRYO14609 159 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 WBP4O75554 376 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 TRMUO75648 421 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 GYPBP06028 91 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 CLUP10909 449 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 ZNF3P17036 446 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 GABRB1P18505 474 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 ACVR2AP27037 513 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 FMO3P31513 532 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 SLC16A1P53985 500 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 LGALS3BPQ08380 585 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 CDK5R2Q13319 367 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 PDK3Q15120 406 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 LAIR2Q6ISS4 152 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 KRT80Q6KB66 452 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 GCNT2Q8N0V5 402 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 C9orf106Q8NAJ2 232 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 OR8J1Q8NGP2 316 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 APH1BQ8WW43 257 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 PTP4A1Q93096 173 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 LRR1Q96L50 414 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 TSSK2Q96PF2 358 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 RERGLQ9H628 205 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 KLHL9Q9P2J3 617 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 TINAGQ9UJW2 476 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 FAM215AQ9Y5M1 114 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 SPENQ96T58 3664 aaKnown RBP12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 BAHCC1Q9P281 2608 aa12.53□□□□□ -0.4
HERPUD1-203ENST00000379792 IGKV3D-15A0A087WSY6 115 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 NPIPB13A6NJU9 1138 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 FIGNL2A6NMB9 653 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 NPIPB4C9JG80 1138 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 PRRG2O14669 202 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 ENTPD6O75354 484 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 SMNDC1O75940 238 aaKnown RBP eCLIP12.52□□□□□ -0.417e-11■■■□□ 15.1
HERPUD1-203ENST00000379792 SELENOPP49908 381 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 NUDT6P53370 316 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 SNRPGP62308 76 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 RNPS1Q15287 305 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 C1orf185Q5T7R7 199 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 NIPAL3Q6P499 406 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 SEM1Q6ZVN7 128 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 CXXC5Q7LFL8 322 aaKnown RBP12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 MARVELD2Q8N4S9 558 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 OR6X1Q8NH79 312 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 WNT2BQ93097 391 aa12.52□□□□□ -0.41
HERPUD1-203ENST00000379792 OR2M2Q96R28 347 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms