RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 DAB2P98082 770 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 IL18Q14116 193 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 TOMM34Q15785 309 aaPredicted RBP9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 YIF1BQ5BJH7 314 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 MESTQ5EB52 335 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF684Q5T5D7 378 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 IDNKQ5T6J7 187 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 EEF1A1P5Q5VTE0 462 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 C1orf140Q5VVS0 124 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 TRIQKQ629K1 86 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 UNQ9370/PRO34162Q6UXP9 181 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 CDC20BQ86Y33 519 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 ADGRG3Q86Y34 549 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 RAB43Q86YS6 212 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 EID2Q8N6I1 236 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 SLC38A9Q8NBW4 561 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 IFI44Q8TCB0 444 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 HGDQ93099 445 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 KLHL15Q96M94 604 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 CMTM3Q96MX0 182 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 BBC3Q96PG8 261 aaPredicted RBP9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 GFM1Q96RP9 751 aaKnown RBP9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 PTDSS2Q9BVG9 487 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 ZCCHC4Q9H5U6 513 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 WDR54Q9H977 334 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 SDHAF3Q9NRP4 125 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 RYDENQ9NUL5 291 aaKnown RBP9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 ABRACLQ9P1F3 81 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF346Q9UL40 294 aaKnown RBP9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 COPS3Q9UNS2 423 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 FKBP7Q9Y680 259 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 ADAMTS9Q9P2N4 1935 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 LAMA5O15230 3695 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 ASXL3Q9C0F0 2248 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 IGHV3-20A0A0C4DH32 117 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 A0A0G2JK05 382 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 TRBV11-1A0A0K0K1C0 115 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 A0A1W2PRG6 482 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 NOTOA8MTQ0 251 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 KHNYNO15037 678 aaKnown RBP9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 FLRT2O43155 660 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 ZFAND5O76080 213 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 DXOO77932 396 aaKnown RBP9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF432O94892 652 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 OR6A2O95222 327 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 TIAF1O95411 115 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 PRKCAP17252 672 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 APEX1P27695 318 aaKnown RBP9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 THBS2P35442 1172 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 HCCSP53701 268 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 RPL27P61353 136 aaKnown RBP9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 EGR3Q06889 387 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 COL28A1Q2UY09 1125 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 HACD4Q5VWC8 232 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 MZT2BQ6NZ67 158 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 BAIAP2L2Q6UXY1 529 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 RPTNQ6XPR3 784 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 SHISA6Q6ZSJ9 500 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 AKAP14Q86UN6 197 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 LSRQ86X29 649 aaPredicted RBP9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 TIGD4Q8IY51 512 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 Q8N402 240 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 RFLNBQ8N5W9 214 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 C19orf18Q8NEA5 215 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 SLC22A8Q8TCC7 542 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 DUSP19Q8WTR2 217 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNRF4Q8WWF5 429 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 THRSPQ92748 146 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF524Q96C55 264 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 ADAD1Q96M93 576 aaKnown RBP9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 SPSB2Q99619 263 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 WDR77Q9BQA1 342 aaPredicted RBP9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 CRB3Q9BUF7 120 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 TXNIPQ9H3M7 391 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 WDR76Q9H967 626 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 CYSLTR2Q9NS75 346 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 ACOXLQ9NUZ1 547 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 MRPL39Q9NYK5 338 aaKnown RBP9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 TAS2R5Q9NYW4 299 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 TEKT2Q9UIF3 430 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF281Q9Y2X9 895 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 PI4KAP42356 2102 aa9.47□□□□□ -0.89
POLR2J3-201ENST00000379340 IGLV3-32A0A0A0MS00 114 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 SPAARA0A1B0GVQ0 90 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 NPIPB13A6NJU9 1138 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 CYSRT1A8MQ03 144 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 NPIPB4C9JG80 1138 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 ETV2O00321 342 aaPredicted RBP9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 NTN3O00634 580 aaPredicted RBP9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 ADAM10O14672 748 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF208O43345 1280 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 SERPINI2O75830 405 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 KRT8P05787 483 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 TRAPPC2P0DI81 140 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 TRAPPC2BP0DI82 140 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 PRKAR1AP10644 381 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 NPR2P20594 1047 aa9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 MAPK3P27361 379 aaPredicted RBP9.46□□□□□ -0.89
POLR2J3-201ENST00000379340 GRPRP30550 384 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms