RNA–Protein interactions for RNA: ENST00000360019.7

CLN3-206, Transcript of CLN3, battenin, humanhuman

TSL 2 BASIC

Gene CLN3, Length 1,840 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN3-206ENST00000360019 C1QTNF9P0C862 333 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 JUNBP17275 347 aaPredicted RBP16.63■□□□□ 0.25
CLN3-206ENST00000360019 SPI1P17947 270 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 ENPP1P22413 925 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 GSTT1P30711 240 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 DAP3P51398 398 aaKnown RBP16.63■□□□□ 0.25
CLN3-206ENST00000360019 AGFG1P52594 562 aaKnown RBP16.63■□□□□ 0.25
CLN3-206ENST00000360019 SLC16A1P53985 500 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 CLDN18P56856 261 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 TMPRSS3P57727 454 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 RPS7P62081 194 aaKnown RBP16.63■□□□□ 0.25
CLN3-206ENST00000360019 ZNF169Q14929 603 aaPredicted RBP16.63■□□□□ 0.25
CLN3-206ENST00000360019 TBR1Q16650 682 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 KLHL22Q53GT1 634 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 TMEM225Q6GV28 225 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 LRRC69Q6ZNQ3 347 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 ADCK1Q86TW2 530 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 SVOPQ8N4V2 548 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 OR51L1Q8NGJ5 315 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 CDCA4Q9BXL8 241 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 SYT4Q9H2B2 425 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 FGF20Q9NP95 211 aaPredicted RBP16.63■□□□□ 0.25
CLN3-206ENST00000360019 NPIPA1Q9UND3 350 aa16.63■□□□□ 0.25
CLN3-206ENST00000360019 DIMT1Q9UNQ2 313 aaKnown RBP16.63■□□□□ 0.25
CLN3-206ENST00000360019 EXOGQ9Y2C4 368 aaKnown RBP16.63■□□□□ 0.25
CLN3-206ENST00000360019 LOC102725191A0A1B0GVB3 256 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 PRSS37A4D1T9 235 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 MKRN2OSH3BPM6 223 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 M0R3G1 203 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 DCTN6O00399 190 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 XKRYO14609 159 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 SMAD9O15198 467 aaKnown RBP16.62■□□□□ 0.25
CLN3-206ENST00000360019 DNPH1O43598 174 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 TRAF3IP2O43734 574 aaPredicted RBP16.62■□□□□ 0.25
CLN3-206ENST00000360019 CXCL13O43927 109 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 BCL10O95999 233 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 ZNF708P17019 499 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 ZNF24P17028 368 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 EIF1AXP47813 144 aaKnown RBP16.62■□□□□ 0.25
CLN3-206ENST00000360019 SLC25A1P53007 311 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 CARD18P57730 90 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 Q6ZS92 163 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 ASB18Q6ZVZ8 466 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 UEVLDQ8IX04 471 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 OR51G2Q8NGK0 314 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 OXGR1Q96P68 337 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 KLHL13Q9P2N7 655 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 NOX1Q9Y5S8 564 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 KIAA1549Q9HCM3 1950 aa16.62■□□□□ 0.25
CLN3-206ENST00000360019 RAB36O95755 333 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 TMED1Q13445 227 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 TBCEQ15813 527 aaPredicted RBP16.61■□□□□ 0.25
CLN3-206ENST00000360019 PM20D2Q8IYS1 436 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 RBMXL3Q8N7X1 1067 aaKnown RBP16.61■□□□□ 0.25
CLN3-206ENST00000360019 NEIL3Q8TAT5 605 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 EXTL1Q92935 676 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 ABTB1Q969K4 478 aaPredicted RBP16.61■□□□□ 0.25
CLN3-206ENST00000360019 MUL1Q969V5 352 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 SNX18Q96RF0 628 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 NAA11Q9BSU3 229 aaPredicted RBP16.61■□□□□ 0.25
CLN3-206ENST00000360019 VCX3AQ9NNX9 186 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 HAO2Q9NYQ3 351 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 VSX1Q9NZR4 365 aaPredicted RBP16.61■□□□□ 0.25
CLN3-206ENST00000360019 CLEC2DQ9UHP7 191 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 RASD1Q9Y272 281 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 DSPP15924 2871 aaKnown RBP16.61■□□□□ 0.25
CLN3-206ENST00000360019 IRGMA1A4Y4 181 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 J3QRE1 110 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 TAF4O00268 1085 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 TFECO14948 347 aaPredicted RBP16.61■□□□□ 0.25
CLN3-206ENST00000360019 INMTO95050 263 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 RENP00797 406 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 PTHP01270 115 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 DCKP27707 260 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 UCNP55089 124 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 RAB39AQ14964 217 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 LINC01590Q5TEZ4 76 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 OR6V1Q8N148 313 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 ZMYND19Q96E35 227 aaPredicted RBP16.61■□□□□ 0.25
CLN3-206ENST00000360019 ABHD17AQ96GS6 310 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 ZNF845Q96IR2 970 aaPredicted RBP16.61■□□□□ 0.25
CLN3-206ENST00000360019 EMC6Q9BV81 110 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 ADGRL4Q9HBW9 690 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 TNFRSF10DQ9UBN6 386 aa16.61■□□□□ 0.25
CLN3-206ENST00000360019 PIEZO2Q9H5I5 2752 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 TRGV5A0A0B4J1U4 118 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 SLC22A23A1A5C7 686 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 LCKP06239 509 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 ZNF43P17038 809 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 BIDP55957 195 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 SRYQ05066 204 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 SLC35D3Q5M8T2 416 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 FOXB2Q5VYV0 432 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 ZHX1-C8orf76Q96EF9 292 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 TAAR6Q96RI8 345 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 NUAK2Q9H093 628 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 TSPAN10Q9H1Z9 355 aaPredicted RBP16.6■□□□□ 0.25
CLN3-206ENST00000360019 LDAHQ9H6V9 325 aa16.6■□□□□ 0.25
CLN3-206ENST00000360019 SRA1Q9HD15 236 aaKnown RBP16.6■□□□□ 0.25
CLN3-206ENST00000360019 SPRR3Q9UBC9 169 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms