RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ACAA2P42765 397 aaKnown RBP13.56□□□□□ -0.24
DDX55-202ENST00000354291 CAPZA2P47755 286 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 STX1BP61266 288 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 ARF1P84077 181 aaKnown RBP13.56□□□□□ -0.24
DDX55-202ENST00000354291 CEACAM7Q14002 265 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 RGNQ15493 299 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 AGBL2Q5U5Z8 902 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 RNF220Q5VTB9 566 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 NIPAL3Q6P499 406 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 ZNF836Q6ZNA1 936 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 DOK3Q7L591 496 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 LRP11Q86VZ4 500 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 C1QL4Q86Z23 238 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 IL17RDQ8NFM7 739 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 OR9I1Q8NGQ6 314 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 GTF2H4Q92759 462 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 RAB39BQ96DA2 213 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 C7orf26Q96N11 449 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 SF3B5Q9BWJ5 86 aaKnown RBP13.56□□□□□ -0.24
DDX55-202ENST00000354291 NELFAQ9H3P2 528 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 PDP1Q9P0J1 537 aaPredicted RBP13.56□□□□□ -0.24
DDX55-202ENST00000354291 ZNF443Q9Y2A4 671 aaPredicted RBP13.56□□□□□ -0.24
DDX55-202ENST00000354291 NOX1Q9Y5S8 564 aa13.56□□□□□ -0.24
DDX55-202ENST00000354291 A8MVM7 634 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 TMEM229AB2RXF0 380 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 CLIC1O00299 241 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 RP2O75695 350 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 NCR1O76036 304 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 NCF2P19878 526 aaPredicted RBP13.55□□□□□ -0.24
DDX55-202ENST00000354291 OMGP23515 440 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 GCH1P30793 250 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 PCGF2P35227 344 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 ARR3P36575 388 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 MRPL19P49406 292 aaKnown RBP13.55□□□□□ -0.24
DDX55-202ENST00000354291 MRPS11P82912 194 aaKnown RBP13.55□□□□□ -0.24
DDX55-202ENST00000354291 ROR2Q01974 943 aaKnown RBP13.55□□□□□ -0.24
DDX55-202ENST00000354291 FADDQ13158 208 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 OR7A5Q15622 319 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 ALKBH6Q3KRA9 238 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 GTDC1Q4AE62 458 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 FBLN7Q53RD9 439 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 PRAMEF8Q5VWM4 474 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 PRAMEF7Q5VXH5 474 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 ZNF771Q7L3S4 317 aaPredicted RBP13.55□□□□□ -0.24
DDX55-202ENST00000354291 MDP1Q86V88 176 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 CADM2Q8N3J6 435 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 SLC25A28Q96A46 364 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 TMEM19Q96HH6 336 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 C1orf147Q96MC9 270 aaPredicted RBP13.55□□□□□ -0.24
DDX55-202ENST00000354291 SPATA9Q9BWV2 254 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 TAPBPLQ9BX59 468 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 PIF1Q9H611 641 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 ZMAT3Q9HA38 289 aaKnown RBP13.55□□□□□ -0.24
DDX55-202ENST00000354291 TCF7L2Q9NQB0 619 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 DUSP13Q9UII6 198 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 ARHGAP32A7KAX9 2087 aa13.55□□□□□ -0.24
DDX55-202ENST00000354291 A0A096LPI6 279 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 ZNF503-AS2A6NEH8 195 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 LIPT2A6NK58 231 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 POLR3GO15318 223 aaPredicted RBP13.54□□□□□ -0.24
DDX55-202ENST00000354291 FSHBP01225 129 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 RAD52P43351 418 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 GLIPR1L2Q4G1C9 344 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 GKAP1Q5VSY0 366 aaPredicted RBP13.54□□□□□ -0.24
DDX55-202ENST00000354291 CREB3L2Q70SY1 520 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 BCL6BQ8N143 479 aaPredicted RBP13.54□□□□□ -0.24
DDX55-202ENST00000354291 CLIP4Q8N3C7 705 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 LRRC8CQ8TDW0 803 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 SLC35B4Q969S0 331 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 GPA33Q99795 319 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 PAIP1Q9H074 479 aaKnown RBP13.54□□□□□ -0.24
DDX55-202ENST00000354291 BCL2L10Q9HD36 194 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 A4GALTQ9NPC4 353 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 MYEF2Q9P2K5 600 aaKnown RBP13.54□□□□□ -0.24
DDX55-202ENST00000354291 ZNF69Q9UC07 566 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 RYR3Q15413 4870 aa13.54□□□□□ -0.24
DDX55-202ENST00000354291 AQP7P3A6NL99 342 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 DEAF1O75398 565 aaPredicted RBP13.53□□□□□ -0.24
DDX55-202ENST00000354291 VAMP5O95183 116 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 RNASE1P07998 156 aaKnown RBP13.53□□□□□ -0.24
DDX55-202ENST00000354291 BMP2P12643 396 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 GATA3P23771 443 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 MAGEB1P43366 347 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 SH3BGRP55822 239 aaPredicted RBP13.53□□□□□ -0.24
DDX55-202ENST00000354291 LCN2P80188 198 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 RPS26P11Q5JNZ5 115 aaPredicted RBP13.53□□□□□ -0.24
DDX55-202ENST00000354291 SLC2A7Q6PXP3 512 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 GOLGA6L1Q8N7Z2 621 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 SYT14Q8NB59 555 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 TMIGD2Q96BF3 282 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 MMP27Q9H306 513 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 ADPRHL2Q9NX46 363 aa13.53□□□□□ -0.24
DDX55-202ENST00000354291 A0A1W2PPW3 197 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 C5orf58C9J3I9 102 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 IGHV2-5P01817 119 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 PRG2P13727 222 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 ETS2P15036 469 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 PPIBP23284 216 aaKnown RBP13.52□□□□□ -0.25
DDX55-202ENST00000354291 GLRXP35754 106 aa13.52□□□□□ -0.25
DDX55-202ENST00000354291 IDH3AP50213 366 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms