RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 PDCD1LG2Q9BQ51 273 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 PPA2Q9H2U2 334 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 EMC9Q9Y3B6 208 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 PPIL1Q9Y3C6 166 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 FGF17O60258 216 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 RAF1P04049 648 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 VEGFCP49767 419 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 EEF1A2Q05639 463 aaKnown RBP15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 LIPNQ5VXI9 398 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR14K1Q8NGZ2 314 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 A0A087WV62 115 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 SULT1C2O00338 296 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 FOSL2P15408 326 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 PRKACBP22694 351 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 CD1CP29017 333 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 SEC61A1P61619 476 aaKnown RBP15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 RSC1A1Q92681 617 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 CMSS1Q9BQ75 279 aaKnown RBP15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 METTL9Q9H1A3 318 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 BOKQ9UMX3 212 aaPredicted RBP15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 KNTC1P50748 2209 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 SMCO3A2RU48 225 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 DBHP09172 617 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 HYAL4Q2M3T9 481 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 EXOSC6Q5RKV6 272 aaKnown RBP15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 C1orf140Q5VVS0 124 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 MEX3BQ6ZN04 569 aaKnown RBP15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 ESPNLQ6ZVH7 1005 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 ACKR4Q9NPB9 350 aa15.73■□□□□ 0.11
TRAPPC11-201ENST00000334690 ASPDHA6ND91 283 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 CD22P20273 847 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 MSX1P28360 303 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 BIDP55957 195 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 SYS1Q8N2H4 156 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR1S1Q8NH92 325 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 GOT1L1Q8NHS2 421 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 BAHD1Q8TBE0 780 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 RSPRY1Q96DX4 576 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR51B4Q9Y5P0 310 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 ASCC3Q8N3C0 2202 aaKnown RBP15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 EIF1BO60739 113 aaKnown RBP15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 HOXB5P09067 269 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 MFAP5Q13361 173 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 NKG7Q16617 165 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 PAQR6Q6TCH4 344 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 GDPD3Q7L5L3 318 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 OR5L1Q8NGL2 311 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 MMP17Q9ULZ9 603 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 GPR55Q9Y2T6 319 aaPredicted RBP15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 SMCHD1A6NHR9 2005 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 LOC100289279A0A1B0GTE1 492 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 A0A1B0GV50 99 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 CER1O95813 267 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 CCR2P41597 374 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 KIAA0040Q15053 153 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 KRBOX4Q5JUW0 171 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC6A18Q96N87 628 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 OPALINQ96PE5 141 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 SELENOIQ9C0D9 397 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 TK1P04183 234 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 CTSLP07711 333 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 WDR88Q6ZMY6 472 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 ZNF679Q8IYX0 411 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 ZNF286AQ9HBT8 521 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 RAB9BQ9NP90 201 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 COQ3Q9NZJ6 369 aa15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 MRPS28Q9Y2Q9 187 aaKnown RBP15.72■□□□□ 0.11
TRAPPC11-201ENST00000334690 A0A1B0GX78 115 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 B8ZZF3 427 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 GABARAPH6UMI1 98 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 NSA2O95478 260 aaKnown RBP15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 C14orf28Q4W4Y0 310 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 GLYATL3Q5SZD4 288 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 TMEM99Q8N816 258 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 TMEFF2Q9UIK5 374 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 UPK1AO00322 258 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 SELENOFO60613 162 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 DDAH2O95865 285 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 DIO1P49895 249 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 ARF1P84077 181 aaKnown RBP15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 AQP6Q13520 282 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 PLCXD3Q63HM9 321 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 Q6ZTK2 550 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 SLC16A14Q7RTX9 510 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 CNRIP1Q96F85 164 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 FGF20Q9NP95 211 aaPredicted RBP15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 BOLA1Q9Y3E2 137 aa15.71■□□□□ 0.11
TRAPPC11-201ENST00000334690 H0Y8X5 98 aa15.71■□□□□ 0.1
TRAPPC11-201ENST00000334690 ZNF749O43361 778 aa15.71■□□□□ 0.1
TRAPPC11-201ENST00000334690 SIGLEC6O43699 453 aa15.71■□□□□ 0.1
TRAPPC11-201ENST00000334690 KCNK2O95069 426 aa15.71■□□□□ 0.1
TRAPPC11-201ENST00000334690 MTCP1P56278 107 aa15.71■□□□□ 0.1
TRAPPC11-201ENST00000334690 SF3B4Q15427 424 aaKnown RBP eCLIP15.71■□□□□ 0.12e-6■■■■□ 22.6
TRAPPC11-201ENST00000334690 ADGRE4PQ86SQ3 457 aa15.71■□□□□ 0.1
TRAPPC11-201ENST00000334690 CLEC1AQ8NC01 280 aa15.71■□□□□ 0.1
TRAPPC11-201ENST00000334690 MIB2Q96AX9 1013 aa15.71■□□□□ 0.1
TRAPPC11-201ENST00000334690 SLC19A3Q9BZV2 496 aa15.71■□□□□ 0.1
TRAPPC11-201ENST00000334690 KRBOX1C9JBD0 128 aa15.7■□□□□ 0.1
TRAPPC11-201ENST00000334690 MRPL33O75394 65 aaKnown RBP15.7■□□□□ 0.1
TRAPPC11-201ENST00000334690 CALCBP10092 127 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 140.4 ms