RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 CYB561P49447 251 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 NOVA1P51513 510 aaKnown RBP16.53■□□□□ 0.24
USP39-201ENST00000323701 OC90Q02509 493 aaPredicted RBP16.53■□□□□ 0.24
USP39-201ENST00000323701 ETFDHQ16134 617 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 GTPBP8Q8N3Z3 284 aaPredicted RBP16.53■□□□□ 0.24
USP39-201ENST00000323701 C4orf36Q96KX1 117 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 HES7Q9BYE0 225 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 CHST11Q9NPF2 352 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 MED29Q9NX70 200 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 B3GAT1Q9P2W7 334 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 CORINQ9Y5Q5 1042 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 NEURL1O76050 574 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 IFNGR1P15260 489 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 RBMS1P29558 406 aaKnown RBP16.53■□□□□ 0.24
USP39-201ENST00000323701 P2RY4P51582 365 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 TLE3Q04726 772 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 ZNF829Q3KNS6 432 aaPredicted RBP16.53■□□□□ 0.24
USP39-201ENST00000323701 Q6ZNX1 250 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 SLC35F2Q8IXU6 374 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 ZBTB8AQ96BR9 441 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 TMEM41AQ96HV5 264 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 SERINC1Q9NRX5 453 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 DLL3Q9NYJ7 618 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 PLA2G3Q9NZ20 509 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 STUB1Q9UNE7 303 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 KLHDC2Q9Y2U9 406 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 GRIP1Q9Y3R0 1128 aa16.53■□□□□ 0.24
USP39-201ENST00000323701 BOD1L1Q8NFC6 3051 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 OR2M5A3KFT3 312 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 PRSS37A4D1T9 235 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 J3QLW9 94 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 P04436 131 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 ZNF19P17023 458 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 WT1P19544 449 aaPredicted RBP16.52■□□□□ 0.24
USP39-201ENST00000323701 PSMA1P25786 263 aaKnown RBP16.52■□□□□ 0.24
USP39-201ENST00000323701 DSCR4P56555 118 aaPredicted RBP16.52■□□□□ 0.24
USP39-201ENST00000323701 FABP5Q01469 135 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 ACSM1Q08AH1 577 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 POU4F2Q12837 409 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 MOGQ16653 247 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 TP53I3Q53FA7 332 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 SLC35D3Q5M8T2 416 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 EEF1A1P5Q5VTE0 462 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 NHLRC1Q6VVB1 395 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 SCAIQ8N9R8 606 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 BORCS5Q969J3 196 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 WDR76Q9H967 626 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 ISYNA1Q9NPH2 558 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 BABAM2Q9NXR7 383 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 ALKBH4Q9NXW9 302 aa16.52■□□□□ 0.24
USP39-201ENST00000323701 CACNA1CQ13936 2221 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 H0YC42 278 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 J3QRK9 145 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 SNX4O95219 450 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 IGHMP01871 453 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 ADH6P28332 368 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 EIF1P41567 113 aaKnown RBP16.51■□□□□ 0.23
USP39-201ENST00000323701 SERPINB10P48595 397 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 MAP2K6P52564 334 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 POU3F1Q03052 451 aaPredicted RBP16.51■□□□□ 0.23
USP39-201ENST00000323701 LGALS3BPQ08380 585 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 ZP4Q12836 540 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 RAET1LQ5VY80 246 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 LINC00696Q6ZRV3 163 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 POMGNT2Q8NAT1 580 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 SYT14Q8NB59 555 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 UFD1Q92890 307 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 TSPAN10Q9H1Z9 355 aaPredicted RBP16.51■□□□□ 0.23
USP39-201ENST00000323701 SACM1LQ9NTJ5 587 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 TXNL4BQ9NX01 149 aaKnown RBP16.51■□□□□ 0.23
USP39-201ENST00000323701 LRFN1Q9P244 771 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 FAM47E-STBD1D6RA91 191 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 PSMD9O00233 223 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 AKAP8O43823 692 aaKnown RBP16.51■□□□□ 0.23
USP39-201ENST00000323701 CEACAM1P13688 526 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 CTLA4P16410 223 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 UGT2B10P36537 528 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 SELENBP1Q13228 472 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 LCN1P1Q5VSP4 162 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 TMPRSS11AQ6ZMR5 421 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 USP43Q70EL4 1123 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 ZNF554Q86TJ5 538 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 TIGD4Q8IY51 512 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 TMED9Q9BVK6 235 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 INPP5EQ9NRR6 644 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 ING1Q9UK53 422 aaPredicted RBP16.51■□□□□ 0.23
USP39-201ENST00000323701 DKKL1Q9UK85 242 aa16.51■□□□□ 0.23
USP39-201ENST00000323701 XKRYO14609 159 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 FZD7O75084 574 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 CBR3O75828 277 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 WDPCPO95876 746 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 OR2T7P0C7T2 308 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 GTF2E2P29084 291 aaKnown RBP16.5■□□□□ 0.23
USP39-201ENST00000323701 TGM4P49221 684 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 B3GALT5-AS1P59052 145 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 C22orf42Q6IC83 251 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 JMJD6Q6NYC1 403 aaPredicted RBP16.5■□□□□ 0.23
USP39-201ENST00000323701 TUBA3EQ6PEY2 450 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 PLEKHG7Q6ZR37 379 aa16.5■□□□□ 0.23
USP39-201ENST00000323701 YRDCQ86U90 279 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms