RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 ERV3-1Q14264 604 aa11.69□□□□□ -0.54
DNMT3A-202ENST00000321117 ZNF169Q14929 603 aaPredicted RBP11.69□□□□□ -0.54
DNMT3A-202ENST00000321117 SLC25A24Q6NUK1 477 aa11.69□□□□□ -0.54
DNMT3A-202ENST00000321117 SVBPQ8N300 66 aa11.69□□□□□ -0.54
DNMT3A-202ENST00000321117 RELL2Q8NC24 303 aaPredicted RBP11.69□□□□□ -0.54
DNMT3A-202ENST00000321117 TSSK2Q96PF2 358 aa11.69□□□□□ -0.54
DNMT3A-202ENST00000321117 VRK1Q99986 396 aaPredicted RBP11.69□□□□□ -0.54
DNMT3A-202ENST00000321117 SLC25A21Q9BQT8 299 aaPredicted RBP11.69□□□□□ -0.54
DNMT3A-202ENST00000321117 UBQLN4Q9NRR5 601 aa11.69□□□□□ -0.54
DNMT3A-202ENST00000321117 SHISA3A0PJX4 238 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 LILRB3O75022 631 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 IL5P05113 134 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 SFTPBP07988 381 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 MAP2K6P52564 334 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 FGL2Q14314 439 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 Q6ZTK2 550 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 PXKQ7Z7A4 578 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 OR2L13Q8N349 312 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 TEX19Q8NA77 164 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 PAQR8Q8TEZ7 354 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 CPNE2Q96FN4 548 aaPredicted RBP11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 LRRC46Q96FV0 321 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 CNTNAP3BQ96NU0 1288 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 ZMAT3Q9HA38 289 aaKnown RBP11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 TPT1P13693 172 aaKnown RBP11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 HHEXQ03014 270 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 DUSP2Q05923 314 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 NDUFAF7Q7L592 441 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 ZSCAN1Q8NBB4 408 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 OR4C16Q8NGL9 310 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 APOBEC4Q8WW27 367 aaKnown RBP11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 TEX101Q9BY14 249 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 SFXN1Q9H9B4 322 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 TET1Q8NFU7 2136 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 A0A087WV62 115 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 M0R036 132 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 TOR1AO14656 332 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 ZNF208O43345 1280 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 FADS1O60427 444 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 HNRNPA2B1P22626 353 aaKnown RBP11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 HTR2CP28335 458 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 PLCXD2Q0VAA5 305 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 NFATC4Q14934 902 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 TSC22D1Q15714 1073 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 ELFN2Q5R3F8 820 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 MRM1Q6IN84 353 aaKnown RBP11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 COMTD1Q86VU5 262 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 ACBD4Q8NC06 268 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 HGDQ93099 445 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 FOXRED1Q96CU9 486 aaPredicted RBP11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 SCML1Q9UN30 329 aa11.68□□□□□ -0.54
DNMT3A-202ENST00000321117 TEX13DA0A0J9YY54 714 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 BRINP1O60477 761 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 NDUFB6O95139 128 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 CISD3P0C7P0 127 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 RAB3AP20336 220 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 FUT5Q11128 374 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 MLF2Q15773 248 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 ZIC1Q15915 447 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 MEP1BQ16820 701 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 PRR22Q8IZ63 422 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 OR14A16Q8NHC5 309 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 ADAMTS18Q8TE60 1221 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 COX14Q96I36 57 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 NECAB3Q96P71 396 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 ADOQ96SZ5 270 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 APMAPQ9HDC9 416 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 FBXO34Q9NWN3 711 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 CPNE7Q9UBL6 633 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 C14orf166Q9Y224 244 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 LOC100289279A0A1B0GTE1 492 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 A0A1W2PPV9 198 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 ITGA5P08648 1049 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 RBMXP38159 391 aaKnown RBP11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 GLO1Q04760 184 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 CDONQ4KMG0 1287 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 KIRREL2Q6UWL6 708 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 ZNF704Q6ZNC4 412 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 ANKRD33Q7Z3H0 272 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 SPICQ8N5J4 248 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 PLPP7Q8NBV4 271 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 LHX9Q9NQ69 397 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 RHPN2P1A8MT19 583 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 C17orf105B2RV13 164 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 WDPCPO95876 746 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 SCGB1D2O95969 90 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 CEACAM5P06731 702 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 MAGEB1P43366 347 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 RAB5BP61020 215 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 HLXQ14774 488 aaPredicted RBP11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 ELP5Q8TE02 316 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 ASB17Q8WXJ9 295 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 POFUT1Q9H488 388 aa11.67□□□□□ -0.54
DNMT3A-202ENST00000321117 GSTZ1O43708 216 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-202ENST00000321117 ZFPL1O95159 310 aa11.66□□□□□ -0.54
DNMT3A-202ENST00000321117 RECKO95980 971 aa11.66□□□□□ -0.54
DNMT3A-202ENST00000321117 ERCC1P07992 297 aaPredicted RBP11.66□□□□□ -0.54
DNMT3A-202ENST00000321117 ADRB1P08588 477 aa11.66□□□□□ -0.54
DNMT3A-202ENST00000321117 RPS27P42677 84 aaKnown RBP11.66□□□□□ -0.54
DNMT3A-202ENST00000321117 SERTAD2Q14140 314 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.1 ms