RNA–Protein interactions for RNA: ENST00000297405.9

CSMD3-201, Transcript of CUB and Sushi multiple domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSMD3, Length 13,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-201ENST00000297405 FBXO10Q9UK96 956 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 STYXL1Q9Y6J8 313 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 RCCD1A6NED2 376 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 H3BMH7 237 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ENPP3O14638 875 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SIAH2O43255 324 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TBX19O60806 448 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 OR4F21O95013 312 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 FABP9Q0Z7S8 132 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 KLF1Q13351 362 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ADPRMQ3LIE5 342 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TRILQ7L0X0 811 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 NLRC3Q7RTR2 1065 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 LURAP1LQ8IV03 231 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 KCNA7Q96RP8 456 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 STEAP1Q9UHE8 339 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 USP22Q9UPT9 525 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TRBV9A0A0B4J1U6 114 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TRDCB7Z8K6 153 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 FOXE1O00358 373 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 OR4Q2P0C623 313 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 MLF1P58340 268 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 BPIFB2Q8N4F0 458 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 PDXPQ96GD0 296 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SENP5Q96HI0 755 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SENP8Q96LD8 212 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ZNF300Q96RE9 604 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 HCAR1Q9BXC0 346 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TMPRSS13Q9BYE2 586 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SERTAD4Q9NUC0 356 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 NDOR1Q9UHB4 597 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 HEMK1Q9Y5R4 338 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 C1orf226A1L170 272 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ANHXE9PGG2 379 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 BLOC1S5-TXNDC5H3BN57 136 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 RECQL4O94761 1208 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ALAS2P22557 587 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TNFSF4P23510 183 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 CARD18P57730 90 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 PLP1P60201 277 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 DHODHQ02127 395 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 NRG1Q02297 640 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 HES1Q14469 280 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 PAFAH1B3Q15102 231 aaKnown RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SLC35G1Q2M3R5 365 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 Q499Y3 187 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 KIAA0895LQ68EN5 471 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ZNF534Q76KX8 674 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ADGRG5Q8IZF4 528 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 DTWD1Q8N5C7 304 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ZFP62Q8NB50 900 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 LCN9Q8WX39 176 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ST8SIA2Q92186 375 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 PSMG2Q969U7 264 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ACO2Q99798 780 aaKnown RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 DHRS4Q9BTZ2 278 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 CPA4Q9UI42 421 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 KLF15Q9UIH9 416 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 OSGIN1Q9UJX0 560 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 CA14Q9ULX7 337 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 LOC390937A0A1W2PQ73 354 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SMAD9O15198 467 aaKnown RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SLC16A7O60669 478 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 AREGP15514 252 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SOX3P41225 446 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SPANXN4Q5MJ08 99 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ARHGEF39Q8N4T4 335 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 DTD1Q8TEA8 209 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 RELTQ969Z4 430 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 C1orf74Q96LT6 269 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 NPAS1Q99742 590 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 GPR87Q9BY21 358 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 OR5K4A6NMS3 321 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 CTSLP07711 333 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ADORA3P0DMS8 318 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ZNF16P17020 682 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 EPHA1P21709 976 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 DDTP30046 118 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 OPRD1P41143 372 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 KDM4DQ6B0I6 523 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 DTWD2Q8NBA8 298 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 WFIKKN2Q8TEU8 576 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TAAR9Q96RI9 348 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ZNF724A8MTY0 619 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 ANKRD66B4E2M5 251 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SCO2O43819 266 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 HTR1FP30939 366 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TAS2R40P59535 323 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 PJVKQ0ZLH3 352 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 PMS2P11Q13670 270 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 DALRD3Q5D0E6 543 aaKnown RBP4.51□□□□□ -1.69
CSMD3-201ENST00000297405 IL20RBQ6UXL0 311 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 OVCH1Q7RTY7 1134 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 PIGZQ86VD9 579 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SLC22A24Q8N4F4 322 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 SLC35G3Q8N808 338 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 CAPNS2Q96L46 248 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TMEM59Q9BXS4 323 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 PLEKHF2Q9H8W4 249 aa4.51□□□□□ -1.69
CSMD3-201ENST00000297405 TIMM22Q9Y584 194 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms