RNA–Protein interactions for RNA: ENST00000238688.9

SLIRP-201, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SLIRP, Length 394 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-201ENST00000238688 XKRYO14609 159 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 PHYHO14832 338 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 AIREO43918 545 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 BCL10O95999 233 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 SBK2P0C263 348 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 HIST1H1CP16403 213 aaKnown RBP11.87□□□□□ -0.51
SLIRP-201ENST00000238688 CPEP16870 476 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 TGFBR2P37173 567 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 AQP2P41181 271 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 RPS5P46782 204 aaKnown RBP11.87□□□□□ -0.51
SLIRP-201ENST00000238688 DIO1P49895 249 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 CTXN1P60606 82 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 RPL27P61353 136 aaKnown RBP11.87□□□□□ -0.51
SLIRP-201ENST00000238688 PUDPQ08623 228 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 Q0VFX4 171 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 FOXF1Q12946 379 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 KRR1Q13601 381 aaKnown RBP11.87□□□□□ -0.51
SLIRP-201ENST00000238688 ABHD17BQ5VST6 288 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 H1FNTQ75WM6 255 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-201ENST00000238688 PXKQ7Z7A4 578 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 SYS1Q8N2H4 156 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 LRRC17Q8N6Y2 441 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 ARIH2OSQ8N7S6 290 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 WDSUB1Q8N9V3 476 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 OR52E2Q8NGJ4 325 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 KISS1RQ969F8 398 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-201ENST00000238688 PSMG3-AS1Q96PY0 264 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 CNN2Q99439 309 aaKnown RBP11.87□□□□□ -0.51
SLIRP-201ENST00000238688 PIGQQ9BRB3 760 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 ENKD1Q9H0I2 346 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 ERVK13-1Q9NX77 482 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 BOKQ9UMX3 212 aaPredicted RBP11.87□□□□□ -0.51
SLIRP-201ENST00000238688 FKBP7Q9Y680 259 aa11.87□□□□□ -0.51
SLIRP-201ENST00000238688 CCDC182A6NF36 153 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 LIPT2A6NK58 231 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 PLPP3O14495 311 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 EIF1BO60739 113 aaKnown RBP11.86□□□□□ -0.51
SLIRP-201ENST00000238688 GLCEO94923 617 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 VAMP5O95183 116 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 SLC2A10O95528 541 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 PMS2P2O95744 297 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 LIMS3P0CW19 117 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 LIMS4P0CW20 117 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 RNF224P0DH78 156 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 GRPRP30550 384 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 SRD5A2P31213 254 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 LIPAP38571 399 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 RPS7P62081 194 aaKnown RBP11.86□□□□□ -0.51
SLIRP-201ENST00000238688 SLC35A1P78382 337 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 LTBQ06643 244 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 DYNC1I2Q13409 638 aaKnown RBP11.86□□□□□ -0.51
SLIRP-201ENST00000238688 GALEQ14376 348 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 SLC35F1Q5T1Q4 408 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 DNM1P34Q6PK57 102 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 USP43Q70EL4 1123 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 KCTD20Q7Z5Y7 419 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 ATCAYQ86WG3 371 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 ZNF485Q8NCK3 441 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 UFD1Q92890 307 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 DACH2Q96NX9 599 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 OPALINQ96PE5 141 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 CHST11Q9NPF2 352 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 TRIM36Q9NQ86 728 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 TAS2R5Q9NYW4 299 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 IL20RAQ9UHF4 553 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 RPH3AQ9Y2J0 694 aaPredicted RBP11.86□□□□□ -0.51
SLIRP-201ENST00000238688 CSAG2Q9Y5P2 127 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 TMEM14AQ9Y6G1 99 aa11.86□□□□□ -0.51
SLIRP-201ENST00000238688 CACNA1DQ01668 2161 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 KIAA1549Q9HCM3 1950 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 MT-ND5P03915 603 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 CD1AP06126 327 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 CCL3P10147 92 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 SPI1P17947 270 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 PTNP21246 168 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 DPP4P27487 766 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 CRABP1P29762 137 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 CSNK2A1P68400 391 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-201ENST00000238688 DGUOKQ16854 277 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 KLHL12Q53G59 568 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 IGFL2Q6UWQ7 119 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 ARSKQ6UWY0 536 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 Q6ZS92 163 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 AMER2Q8N7J2 671 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 OR4K13Q8NH42 304 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 MOSPD2Q8NHP6 518 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 PSMF1Q92530 271 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 SNRNP40Q96DI7 357 aaKnown RBP11.85□□□□□ -0.51
SLIRP-201ENST00000238688 THOC3Q96J01 351 aaKnown RBP11.85□□□□□ -0.51
SLIRP-201ENST00000238688 UTP23Q9BRU9 249 aaKnown RBP11.85□□□□□ -0.51
SLIRP-201ENST00000238688 ADGRL4Q9HBW9 690 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 ASB6Q9NWX5 421 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 VSX1Q9NZR4 365 aaPredicted RBP11.85□□□□□ -0.51
SLIRP-201ENST00000238688 B4GALT7Q9UBV7 327 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 STUB1Q9UNE7 303 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 VDAC3Q9Y277 283 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 ADAM18Q9Y3Q7 739 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 DOPEY1Q5JWR5 2465 aa11.85□□□□□ -0.51
SLIRP-201ENST00000238688 TEX13CA0A0J9YWL9 993 aa11.84□□□□□ -0.51
SLIRP-201ENST00000238688 DAPL1A0PJW8 107 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms