RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 SLC6A6P31641 620 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 PTDSS1P48651 473 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 ADORA2A-AS1P86434 159 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 IL1RL1Q01638 556 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 DPY19L2P2Q6ZN68 376 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 UEVLDQ8IX04 471 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 MARVELD2Q8N4S9 558 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 OR8D4Q8NGM9 314 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 SAMD8Q96LT4 415 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 RDH12Q96NR8 316 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 TTYH2Q9BSA4 534 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 TACO1Q9BSH4 297 aaKnown RBP17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 GABARAPL3Q9BY60 117 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 ORC6Q9Y5N6 252 aa17.64■□□□□ 0.41
PDLIM2-221ENST00000622702 MCIDASD6RGH6 385 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 GPR171O14626 319 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 CD14P08571 375 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 IGFBP1P08833 259 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 GLI4P10075 376 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 HLA-DOBP13765 273 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 APEHP13798 732 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 CDH2P19022 906 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 RPL4P36578 427 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 POU3F1Q03052 451 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 C1DQ13901 141 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 GUSBP1Q15486 140 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 DOPEY1Q5JWR5 2465 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 ARHGAP21Q5T5U3 1957 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 TMEM211Q6ICI0 200 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 CREB3L2Q70SY1 520 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 MCEMP1Q8IX19 187 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 GALNT4Q8N4A0 578 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 OR52L1Q8NGH7 329 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 TEX47Q8TBZ9 253 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 PHF3Q92576 2039 aaKnown RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 GMPPAQ96IJ6 420 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 ZFP3Q96NJ6 502 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 VCXQ9H320 206 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 VCX3BQ9H321 246 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 NRIP3Q9NQ35 241 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 EMC3Q9P0I2 261 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 IL20RAQ9UHF4 553 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 FLVCR1Q9Y5Y0 555 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 H3BN98 237 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 SS18L1O75177 396 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 TOXO94900 526 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 IGHMP01871 453 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 YES1P07947 543 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 CEACAM8P31997 349 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 CRISP1P54107 249 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 CTXN1P60606 82 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 PMPCAQ10713 525 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 MRGPRGQ86SM5 289 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 IGFN1Q86VF2 1251 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 ZIC4Q8N9L1 334 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 KATNB1Q9BVA0 655 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 TSSK6Q9BXA6 273 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 TXNIPQ9H3M7 391 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 TBC1D23Q9NUY8 699 aa17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 SMPD3Q9NY59 655 aaPredicted RBP17.63■□□□□ 0.41
PDLIM2-221ENST00000622702 USP9YO00507 2555 aaPredicted RBP17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 DOPEY2Q9Y3R5 2298 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 A0A1W2PRG6 482 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 DLGAP1O14490 977 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 BHLHE40O14503 412 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 ARPC3O15145 178 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 CRHP06850 196 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 DAP3P51398 398 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 SMSP52788 366 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 NPRL3Q12980 569 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 ACKR1Q16570 336 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 RIPPLY2Q5TAB7 128 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 SLC35D2Q76EJ3 337 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 FAM122BQ7Z309 247 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 OR2T33Q8NG76 320 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 TMEM45BQ96B21 275 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 POLDIP3Q9BY77 421 aaKnown RBP17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 BAIAP2Q9UQB8 552 aa17.62■□□□□ 0.41
PDLIM2-221ENST00000622702 PCNX1Q96RV3 2341 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 H0YJX3 145 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 SERPINI2O75830 405 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 PLGP00747 810 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 IL2RAP01589 272 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 IFNGR1P15260 489 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 POU1F1P28069 291 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 GIPRP48546 466 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 ERVK-25P63136 954 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 SNCBQ16143 134 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 CLEC12AQ5QGZ9 265 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 EEF1A1P5Q5VTE0 462 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 GPR139Q6DWJ6 353 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 SLC27A4Q6P1M0 643 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 TUSC5Q8IXB3 177 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 LNX2Q8N448 690 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 ITLN2Q8WWU7 325 aaPredicted RBP17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 ZNF385AQ96PM9 386 aaKnown RBP17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 IFT27Q9BW83 186 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 SLC25A19Q9HC21 320 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 CLEC4AQ9UMR7 237 aa17.61■□□□□ 0.41
PDLIM2-221ENST00000622702 RCE1Q9Y256 329 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 118.2 ms