RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 TUBA1CQ9BQE3 449 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 OR51V1Q9H2C8 321 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 CCDC86Q9H6F5 360 aaKnown RBP18.64■□□□□ 0.57
PNKP-203ENST00000593946 QPCTLQ9NXS2 382 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 B3GAT1Q9P2W7 334 aa18.64■□□□□ 0.57
PNKP-203ENST00000593946 DIMT1Q9UNQ2 313 aaKnown RBP18.64■□□□□ 0.57
PNKP-203ENST00000593946 A0A1W2PRG6 482 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 GYPBP06028 91 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 CELA3AP09093 270 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 GTF2A1P52655 376 aaPredicted RBP18.63■□□□□ 0.57
PNKP-203ENST00000593946 H3F3AP84243 136 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 RAB39AQ14964 217 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 KLHL12Q53G59 568 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 ARMC4Q5T2S8 1044 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 B3GNT6Q6ZMB0 384 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 GGNQ86UU5 652 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 OR9Q1Q8NGQ5 310 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 C9orf43Q8TAL5 461 aaPredicted RBP18.63■□□□□ 0.57
PNKP-203ENST00000593946 MFRPQ9BY79 579 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 EXOGQ9Y2C4 368 aaKnown RBP18.63■□□□□ 0.57
PNKP-203ENST00000593946 SMIM31A0A1B0GVY4 71 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 AQP7P3A6NL99 342 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 ZNF814B7Z6K7 855 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 RAB36O95755 333 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 DCKP27707 260 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 CLDN20P56880 219 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 CSNK2A1P68400 391 aaPredicted RBP18.63■□□□□ 0.57
PNKP-203ENST00000593946 FOXB2Q5VYV0 432 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 RNLSQ5VYX0 342 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 ADCK1Q86TW2 530 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 SLC22A16Q86VW1 577 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 TAS2R16Q9NYV7 291 aa18.63■□□□□ 0.57
PNKP-203ENST00000593946 PCDHGA9Q9Y5G4 932 aaKnown RBP18.63■□□□□ 0.57
PNKP-203ENST00000593946 TRAV17A0A0B4J275 112 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 TNFSF11O14788 317 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 APOL3O95236 402 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 CD97P48960 835 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 SLC25A1P53007 311 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 PPIAP62937 165 aaKnown RBP18.62■□□□□ 0.57
PNKP-203ENST00000593946 HSF1Q00613 529 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 POU3F1Q03052 451 aaPredicted RBP18.62■□□□□ 0.57
PNKP-203ENST00000593946 UBE2UQ5VVX9 321 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 IGFL3Q6UXB1 125 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 NHLRC1Q6VVB1 395 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 GPR141Q7Z602 305 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 GHDCQ8N2G8 530 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 EXD3Q8N9H8 876 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 SNX18Q96RF0 628 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 FAM192AQ9GZU8 254 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 RBM38Q9H0Z9 239 aaKnown RBP18.62■□□□□ 0.57
PNKP-203ENST00000593946 ASB6Q9NWX5 421 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 HAO2Q9NYQ3 351 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 NDUFA13Q9P0J0 144 aa18.62■□□□□ 0.57
PNKP-203ENST00000593946 LOC102725191A0A1B0GVB3 256 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 H0YC42 278 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 XKRYO14609 159 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 DNPH1O43598 174 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 EIF1BO60739 113 aaKnown RBP18.61■□□□□ 0.57
PNKP-203ENST00000593946 SEC14L2O76054 403 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 INMTO95050 263 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 SPI1P17947 270 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 POU3F2P20265 443 aaPredicted RBP18.61■□□□□ 0.57
PNKP-203ENST00000593946 GSTT1P30711 240 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 ACVR1BP36896 505 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 DAP3P51398 398 aaKnown RBP18.61■□□□□ 0.57
PNKP-203ENST00000593946 RPS7P62081 194 aaKnown RBP18.61■□□□□ 0.57
PNKP-203ENST00000593946 B3GLCTQ6Y288 498 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 ESPNLQ6ZVH7 1005 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 OR4F15Q8NGB8 312 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 OR13F1Q8NGS4 319 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 ASB10Q8WXI3 467 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 FCGR1BQ92637 280 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 RORBQ92753 470 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 ADGRG7Q96K78 797 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 RPRD1BQ9NQG5 326 aaKnown RBP18.61■□□□□ 0.57
PNKP-203ENST00000593946 NOX1Q9Y5S8 564 aa18.61■□□□□ 0.57
PNKP-203ENST00000593946 IGF2RP11717 2491 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 ZNF99A8MXY4 864 aaPredicted RBP18.6■□□□□ 0.57
PNKP-203ENST00000593946 H7C1C5 153 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 J3QRE1 110 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 ARHGEF9O43307 516 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 PTHP01270 115 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 LCKP06239 509 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 IFNGR1P15260 489 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 KLK2P20151 261 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 TTKP33981 857 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 STARP49675 285 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 SLC16A1P53985 500 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 GP2P55259 537 aaKnown RBP18.6■□□□□ 0.57
PNKP-203ENST00000593946 LCN6P62502 163 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 LGALS3BPQ08380 585 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 SLC35D3Q5M8T2 416 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 BORAQ6PGQ7 559 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 ASB18Q6ZVZ8 466 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 SLC35D2Q76EJ3 337 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 SHFQ7M4L6 423 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 FAM109AQ8N4B1 249 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 OR51G2Q8NGK0 314 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 ACKR4Q9NPB9 350 aa18.6■□□□□ 0.57
PNKP-203ENST00000593946 PTPRQQ9UMZ3 2332 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms