RNA–Protein interactions for RNA: ENST00000566082.1

USB1-212, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2

Gene USB1, Length 3,888 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-212ENST00000566082 PRODH2Q9UF12 536 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 SPAG17Q6Q759 2223 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 MGAMO43451 1857 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 DSPPQ9NZW4 1301 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 ZNF236Q9UL36 1845 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 IDSB3KWA1 339 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 TPT1P13693 172 aaKnown RBP9.68□□□□□ -0.86
USB1-212ENST00000566082 C5AR1P21730 350 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 ITGB8P26012 769 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 LCN10Q6JVE6 187 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 ZFP82Q8N141 532 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 EID2Q8N6I1 236 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 POFUT1Q9H488 388 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 BIN3Q9NQY0 253 aa9.68□□□□□ -0.86
USB1-212ENST00000566082 WRBO00258 174 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 CFDP00746 253 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 KNG1P01042 644 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 CD3DP04234 171 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 HOXB9P17482 250 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 P2RX1P51575 399 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 AGFG1P52594 562 aaKnown RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 GUCA2AQ02747 115 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 CAMK2DQ13557 499 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 RUNX3Q13761 415 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 ARHGAP11BQ3KRB8 267 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 ABCA11PQ4W5N1 156 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 ADAMTSL4Q6UY14 1074 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 ADGRG3Q86Y34 549 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 PNLDC1Q8NA58 520 aaKnown RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 NEK7Q8TDX7 302 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 C2CD4CQ8TF44 421 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 FAM3DQ96BQ1 224 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 SCGB3A2Q96PL1 93 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 ADOQ96SZ5 270 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 VN1R3Q9BXE9 311 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 NKX6-2Q9C056 277 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 GHITMQ9H3K2 345 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 EXOGQ9Y2C4 368 aaKnown RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 SGCEO43556 437 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 LDOC1O95751 146 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 MPIG6BO95866 241 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 THBS1P07996 1170 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 SPI1P17947 270 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 AMY2BP19961 511 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 ZP3P21754 424 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 DUSP8Q13202 625 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 OR4C16Q8NGL9 310 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 PHYHIPQ92561 330 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 ZNF285Q96NJ3 590 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 TIMM29Q9BSF4 260 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 RPS10P5Q9NQ39 176 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 CGGBP1Q9UFW8 167 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 ING1Q9UK53 422 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 C14orf166Q9Y224 244 aaKnown RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 NYNRINQ9P2P1 1898 aaKnown RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 SHISA3A0PJX4 238 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 SHOXO15266 292 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 ZNF208O43345 1280 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 PRKNO60260 465 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 FBXO24O75426 580 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 TNFP01375 233 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 SULT1A3P0DMM9 295 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 SULT1A4P0DMN0 295 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 HLXQ14774 488 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 MEP1BQ16820 701 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 GLYATL3Q5SZD4 288 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 GLDNQ6ZMI3 551 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 PXKQ7Z7A4 578 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 LSRQ86X29 649 aaPredicted RBP9.67□□□□□ -0.86
USB1-212ENST00000566082 MAFIPQ8WZ33 124 aa9.67□□□□□ -0.86
USB1-212ENST00000566082 TRAV1-2A0A0B4J238 106 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 CDC14CA4D256 554 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SNAPINO95295 136 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 ERCC1P07992 297 aaPredicted RBP9.66□□□□□ -0.86
USB1-212ENST00000566082 DIO1P49895 249 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SLC9A3R2Q15599 337 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 TSC22D1Q15714 1073 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SMAD2Q15796 467 aaKnown RBP9.66□□□□□ -0.86
USB1-212ENST00000566082 TUSC1Q2TAM9 212 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 AWAT2Q6E213 333 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 H3F3CQ6NXT2 135 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 C19orf48Q6RUI8 117 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 GPAT4Q86UL3 456 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SYS1Q8N2H4 156 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 LINC01555Q8NAE3 123 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 THAP3Q8WTV1 239 aaPredicted RBP9.66□□□□□ -0.86
USB1-212ENST00000566082 PMM1Q92871 262 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 GPR137Q96N19 417 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SORCS2Q96PQ0 1159 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 RBP7Q96R05 134 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 PRRT1Q99946 306 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 DNTTIP1Q9H147 329 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 TMEM231Q9H6L2 316 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 PRDM7Q9NQW5 492 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 POLE3Q9NRF9 147 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 STEAP1Q9UHE8 339 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 DAPP1Q9UN19 280 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SIGLEC7Q9Y286 467 aa9.66□□□□□ -0.86
USB1-212ENST00000566082 SF3B6Q9Y3B4 125 aaKnown RBP9.66□□□□□ -0.86
USB1-212ENST00000566082 ETV7Q9Y603 341 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms