RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 MGST1P10620 155 aaKnown RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 NT5EP21589 574 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 CRISP1P54107 249 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 CD81P60033 236 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 SMIM21Q3B7S5 101 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 LARP4Q71RC2 724 aaKnown RBP eCLIP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 NKAPQ8N5F7 415 aaKnown RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 GRAPLQ8TC17 118 aaPredicted RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 KLHDC3Q9BQ90 382 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 ASB8Q9H765 288 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 SETD1AO15047 1707 aaKnown RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 H3BRB1 525 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 HCRTO43612 131 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 GPRIN2O60269 458 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 MTHFD2P13995 350 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 MUC1P15941 1255 aaPredicted RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 OMGP23515 440 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 OR10J1P30954 320 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 HOXC8P31273 242 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 EVX1P49640 407 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 RAB9AP51151 201 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 RAB1AP62820 205 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 DHODHQ02127 395 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 UNC50Q53HI1 259 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 FAM219AQ8IW50 185 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 CLECL1Q8IZS7 167 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 OR6N1Q8NGY5 312 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 GPR152Q8TDT2 470 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 SPRYD4Q8WW59 207 aaPredicted RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 QTRT2Q9H974 415 aaKnown RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 SIDT1Q9NXL6 827 aaKnown RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 A0A0U1RQS6 177 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 PYCR1P32322 319 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 ST8SIA6P61647 398 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 ZP2Q05996 745 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 ABHD18Q0P651 414 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM115Q12893 351 aaPredicted RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 C6orf136Q5SQH8 315 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 OR8G2PQ6IF36 304 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF774Q6NX45 483 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM182Q6ZP80 229 aaPredicted RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 TMPRSS12Q86WS5 348 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 RASGEF1AQ8N9B8 481 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 DUSP18Q8NEJ0 188 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 GRHL3Q8TE85 626 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 POLR1DQ9Y2S0 133 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 LDB2O43679 373 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 AQP8O94778 261 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 OR10J4P0C629 311 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 ALPPL2P10696 532 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 KIR3DL2P43630 455 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 FBLN7Q53RD9 439 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM107Q6UX40 140 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 CFAP52Q8N1V2 620 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 MIB2Q96AX9 1013 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 MSLNLQ96KJ4 702 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 SDHCQ99643 169 aaPredicted RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 CWH43Q9H720 699 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 LYRM2Q9NU23 88 aaPredicted RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 PMM2O15305 246 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 EDNRBP24530 442 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 ABRAXAS2Q15018 415 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 TMPRSS11BQ86T26 416 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF761Q86XN6 746 aaPredicted RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 MUC15Q8N387 334 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 DOK4Q8TEW6 326 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 KCTD13Q8WZ19 329 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC46A2Q9BY10 475 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 POFUT1Q9H488 388 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 AGO4Q9HCK5 861 aaKnown RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 MYOZ1Q9NP98 299 aaPredicted RBP8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 TMEM9BQ9NQ34 198 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 PPIAL4AQ9Y536 164 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 CSAG2Q9Y5P2 127 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 RAMP2O60895 175 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 LRP3O75074 770 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF286BP0CG31 522 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 HTR6P50406 440 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 OR10A3P58181 314 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TAS2R38P59533 333 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 ENDOGQ14249 297 aaKnown RBP8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 ZNF660Q6AZW8 331 aaPredicted RBP8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 FAM199XQ6PEV8 388 aaPredicted RBP8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC39A5Q6ZMH5 540 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 THSD4Q6ZMP0 1018 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 LKAAEAR1Q8TD35 194 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 ISL2Q96A47 359 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TEX37Q96LM6 180 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 REG4Q9BYZ8 158 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 CHST11Q9NPF2 352 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TREX1Q9NSU2 369 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 NAGKQ9UJ70 344 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 SNX11Q9Y5W9 270 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TBC1D3DA0A087WVF3 549 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TBC1D3IA0A087WXS9 549 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TBC1D3EA0A087X179 549 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TBC1D3KA0A087X1G2 549 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TBC1D3BA6NDS4 549 aa8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TBC1D3FA6NER0 549 aaPredicted RBP8.32□□□□□ -1.08
GTF2A1-203ENST00000553612 TBC1D3LB9A6J9 549 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 106 ms