RNA–Protein interactions for RNA: ENST00000520948.5

VEGFA-222, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 1,199 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-222ENST00000520948 GPAT4Q86UL3 456 aa16.04■□□□□ 0.16
VEGFA-222ENST00000520948 C12orf49Q9H741 205 aa16.04■□□□□ 0.16
VEGFA-222ENST00000520948 C6orf203Q9P0P8 240 aaPredicted RBP16.04■□□□□ 0.16
VEGFA-222ENST00000520948 EDARQ9UNE0 448 aa16.04■□□□□ 0.16
VEGFA-222ENST00000520948 NOSIPQ9Y314 301 aaKnown RBP16.04■□□□□ 0.16
VEGFA-222ENST00000520948 NAV3Q8IVL0 2385 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 TUBAL3A6NHL2 446 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 EEF1E1-BLOC1S5C9J1V9 151 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 CDC42EP2O14613 210 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 EEF1E1O43324 174 aaKnown RBP16.03■□□□□ 0.16
VEGFA-222ENST00000520948 TRAF3IP2O43734 574 aaPredicted RBP16.03■□□□□ 0.16
VEGFA-222ENST00000520948 CIB2O75838 187 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 SMNDC1O75940 238 aaKnown RBP eCLIP16.03■□□□□ 0.164e-7■■□□□ 12.8
VEGFA-222ENST00000520948 CST1P01037 141 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 HIST1H2ABP04908 130 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 ADORA3P0DMS8 318 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 HLA-DOBP13765 273 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 ZNF43P17038 809 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 ACTR3P61158 418 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 RPS4XP62701 263 aaKnown RBP16.03■□□□□ 0.16
VEGFA-222ENST00000520948 PUDPQ08623 228 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 ZSCAN26Q16670 478 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 EXOC3L2Q2M3D2 409 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 HIST3H2AQ7L7L0 130 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 ZER1Q7Z7L7 766 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 LUZP2Q86TE4 346 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 CDK20Q8IZL9 346 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 LINC01560Q8TB33 94 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 HIST1H2ACQ93077 130 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 ARMC1Q9NVT9 282 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 PARPBPQ9NWS1 579 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 TMEM5Q9Y2B1 443 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 HIF3AQ9Y2N7 669 aa16.03■□□□□ 0.16
VEGFA-222ENST00000520948 FREM1Q5H8C1 2179 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 TNFRSF11BO00300 401 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 PTP4A3O75365 173 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 MRPL33O75394 65 aaKnown RBP16.02■□□□□ 0.16
VEGFA-222ENST00000520948 ZNF432O94892 652 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 ATE1O95260 518 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 RAF1P04049 648 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 NQO1P15559 274 aaKnown RBP16.02■□□□□ 0.16
VEGFA-222ENST00000520948 SLC9A3P48764 834 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 RPL18Q07020 188 aaKnown RBP16.02■□□□□ 0.16
VEGFA-222ENST00000520948 KEAP1Q14145 624 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 GK3PQ14409 553 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 LAPTM4AQ15012 233 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 DAZAP2Q15038 168 aaPredicted RBP16.02■□□□□ 0.16
VEGFA-222ENST00000520948 ANKDD1AQ495B1 522 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 ZNF770Q6IQ21 691 aaPredicted RBP16.02■□□□□ 0.16
VEGFA-222ENST00000520948 C1orf94Q6P1W5 598 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 MEX3DQ86XN8 651 aaKnown RBP16.02■□□□□ 0.16
VEGFA-222ENST00000520948 WFDC11Q8NEX6 87 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 MBD6Q96DN6 1003 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 GPA33Q99795 319 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 RBM24Q9BX46 236 aaKnown RBP16.02■□□□□ 0.16
VEGFA-222ENST00000520948 FOXD3Q9UJU5 478 aaPredicted RBP16.02■□□□□ 0.16
VEGFA-222ENST00000520948 TMCC3Q9ULS5 477 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 NOX1Q9Y5S8 564 aa16.02■□□□□ 0.16
VEGFA-222ENST00000520948 EFCAB9A8MZ26 197 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 BLOC1S5-TXNDC5H3BN57 136 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 CNOT4O95628 575 aaKnown RBP16.01■□□□□ 0.15
VEGFA-222ENST00000520948 EPXP11678 715 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 AQP2P41181 271 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 PPP1R8Q12972 351 aaKnown RBP16.01■□□□□ 0.15
VEGFA-222ENST00000520948 DEFB113Q30KQ7 82 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 BEND4Q6ZU67 534 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 Q71RC1 249 aaPredicted RBP16.01■□□□□ 0.15
VEGFA-222ENST00000520948 AAED1Q7RTV5 226 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 NANOGNBQ7Z5D8 188 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 UEVLDQ8IX04 471 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 GABRG1Q8N1C3 465 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 LINC00471Q8N535 108 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 LRRC75AQ8NAA5 344 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 MOSPD2Q8NHP6 518 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 FAM46AQ96IP4 442 aaKnown RBP16.01■□□□□ 0.15
VEGFA-222ENST00000520948 RSRC1Q96IZ7 334 aaKnown RBP16.01■□□□□ 0.15
VEGFA-222ENST00000520948 TNFRSF13CQ96RJ3 184 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 SMR3AQ99954 134 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 YY1AP1Q9H869 796 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 REEP1Q9H902 201 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 GALNT8Q9NY28 637 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 ELOVL5Q9NYP7 299 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 PRSS50Q9UI38 385 aa16.01■□□□□ 0.15
VEGFA-222ENST00000520948 FLNAP21333 2647 aaKnown RBP16.01■□□□□ 0.15
VEGFA-222ENST00000520948 NIPBLQ6KC79 2804 aaeCLIP16.01■□□□□ 0.153e-6■■□□□ 13.1
VEGFA-222ENST00000520948 C11orf98E9PRG8 122 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 ZNF26P17031 533 aaPredicted RBP16■□□□□ 0.15
VEGFA-222ENST00000520948 AHCYP23526 432 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 GPR4P46093 362 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 GSSP48637 474 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 CLDN17P56750 224 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 KPNB1Q14974 876 aaKnown RBP16■□□□□ 0.15
VEGFA-222ENST00000520948 MICAQ29983 383 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 ZBED5Q49AG3 693 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 PGBD2Q6P3X8 592 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 ZC3HAV1Q7Z2W4 902 aaKnown RBP16■□□□□ 0.15
VEGFA-222ENST00000520948 TMEM179BQ7Z7N9 219 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 OAFQ86UD1 273 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 KIF18BQ86Y91 864 aa16■□□□□ 0.15
VEGFA-222ENST00000520948 WDFY1Q8IWB7 410 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms