RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 CHMP4BQ9H444 224 aaKnown RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 SLC25A19Q9HC21 320 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 FAM49BQ9NUQ9 324 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 SMPD3Q9NY59 655 aaPredicted RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 GALPQ9UBC7 116 aa3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 EIF3KQ9UBQ5 218 aaKnown RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 PHF3Q92576 2039 aaKnown RBP3.92□□□□□ -1.78
HMGB1P23-201ENST00000518743 ANKRD12Q6UB98 2062 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 A0A0A6YYD4 124 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 KLF18A0A0U1RQI7 1052 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 A0A1W2PNV4 684 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 A0A1W2PR80 420 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 LRIT2A6NDA9 550 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 K7EQD1 137 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 AP3B1O00203 1094 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 BCAS1O75363 584 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ECDO95905 644 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 TNNC2P02585 160 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 GSTT2P0CG29 244 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 GSTT2BP0CG30 244 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZCCHC18P0CG32 403 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ACTR1BP42025 376 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 GNPDA1P46926 289 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 BTG1P62324 171 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 RFTN1Q14699 578 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 SLC17A1Q14916 467 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 NCF4Q15080 339 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ECSCRQ19T08 205 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 EXOC3L2Q2M3D2 409 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF699Q32M78 642 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF585BQ52M93 769 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 BEND6Q5SZJ8 279 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 CCDC183Q5T5S1 534 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 TMEM225Q6GV28 225 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ATRAIDQ6UW56 229 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 IGFL2Q6UWQ7 119 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 FRRS1Q6ZNA5 592 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF771Q7L3S4 317 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 TAS2R42Q7RTR8 314 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ERASQ7Z444 233 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 DCUN1D3Q8IWE4 304 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF683Q8IZ20 524 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 DAW1Q8N136 415 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ARHGAP18Q8N392 663 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ARIH2OSQ8N7S6 290 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 SYT14Q8NB59 555 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 NFAM1Q8NET5 270 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 NUP37Q8NFH4 326 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 SLC22A8Q8TCC7 542 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 SLC2A14Q8TDB8 520 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 GMPPAQ96IJ6 420 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ANKRD36BP1Q96IX9 119 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 C4orf36Q96KX1 117 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 PRICKLE1Q96MT3 831 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 ZNF300Q96RE9 604 aaPredicted RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 OVOL2Q9BRP0 275 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 Q9HAA7 133 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 C1orf123Q9NWV4 160 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 EMCNQ9ULC0 261 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 MRPS33Q9Y291 106 aaKnown RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 MRPS18CQ9Y3D5 142 aaKnown RBP3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 WDR45Q9Y484 360 aa3.91□□□□□ -1.78
HMGB1P23-201ENST00000518743 IGKV2D-30A0A075B6S6 120 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 A0A0J9YVX5 310 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM240BA0A1B0GVZ2 78 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 TUBAL3A6NHL2 446 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 TFECO14948 347 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 LMX1BO60663 402 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 MT-ND1P03886 318 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 PBLDP30039 288 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 CCT6AP40227 531 aaKnown RBP3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 MTIF2P46199 727 aaKnown RBP3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 SLC7A2P52569 658 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 ATP5J2P56134 94 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 YWHAGP61981 247 aaKnown RBP eCLIP3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 ACY1Q03154 408 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZP4Q12836 540 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 DDX39BQ13838 428 aaKnown RBP3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 KIAA0141Q14154 515 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 SELPLGQ14242 412 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 CLEC12BQ2HXU8 276 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 MAJINQ3KP22 176 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 BOLA3Q53S33 107 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 FFAR4Q5NUL3 377 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 MLIPQ5VWP3 458 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 PMF1Q6P1K2 205 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF562Q6V9R5 426 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 FAM92BQ6ZTR7 304 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 STRADAQ7RTN6 431 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 CEACAM19Q7Z692 300 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 LUZP1Q86V48 1076 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR1K1Q8NGR3 316 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 OR2A12Q8NGT7 310 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 SLC37A2Q8TED4 501 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 TMEM190Q8WZ59 177 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 DLX4Q92988 240 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZBTB9Q96C00 473 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 ZNF486Q96H40 463 aaPredicted RBP3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 WACQ9BTA9 647 aa3.9□□□□□ -1.79
HMGB1P23-201ENST00000518743 PKIBQ9C010 78 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms