RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GKN3PP0CG01 181 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 PNMTP11086 282 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 NAT2P11245 290 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ANPEPP15144 967 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 IL7RP16871 459 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF14P17017 642 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF43P17038 809 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 KRT4P19013 534 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 UQCRC2P22695 453 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 GLRXP35754 106 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ACAA2P42765 397 aaKnown RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 MAGEB1P43366 347 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 CAPZA2P47755 286 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 CLDN8P56748 225 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 CLDN17P56750 224 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 RPS23P62266 143 aaKnown RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZP4Q12836 540 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 GNA13Q14344 377 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 FXNQ16595 210 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 GSTA3Q16772 222 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 WHAMMP3Q1A5X7 153 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 CEACAM16Q2WEN9 425 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 TRMT5Q32P41 509 aaKnown RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF311Q5JNZ3 666 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 C1orf140Q5VVS0 124 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 DCAF12L2Q5VW00 463 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 REP15Q6BDI9 236 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ACSM5Q6NUN0 579 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 LRRC74BQ6ZQY2 392 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZCCHC23Q6ZST2 131 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 CCDC36Q8IYA8 594 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF440Q8IYI8 595 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 TMEM123Q8N131 208 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 C4orf33Q8N1A6 199 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 KDM8Q8N371 416 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 GPR137CQ8N3F9 429 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 KIF18AQ8NI77 898 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 NANPQ8TBE9 248 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 TUBGCP3Q96CW5 907 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 LRRC58Q96CX6 371 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 RAB39BQ96DA2 213 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF75AQ96N20 296 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 OR2M2Q96R28 347 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 MECRQ9BV79 373 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 PTDSS2Q9BVG9 487 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF385DQ9H6B1 395 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 UNKLQ9H9P5 680 aaKnown RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 NTN4Q9HB63 628 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 TPSG1Q9NRR2 321 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 DDX28Q9NUL7 540 aaKnown RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 RLIMQ9NVW2 624 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ASIC5Q9NY37 505 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF224Q9NZL3 707 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 SEC14L4Q9UDX3 406 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 MARCOQ9UEW3 520 aaPredicted RBP4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 ZDHHC2Q9UIJ5 367 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 MID2Q9UJV3 735 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 FZR1Q9UM11 496 aa4.38□□□□□ -1.71
SNRNP40-204ENST00000474025 TENM3Q9P273 2699 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 A0A096LPI6 279 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 A0A1W2PPW3 197 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 CDHR4A6H8M9 788 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 DNAJC9-AS1A6NH13 148 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 CDC14BO60729 498 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 SLC43A1O75387 559 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 AHSA1O95433 338 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 CPSF4O95639 269 aaKnown RBP4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 SHBGP04278 402 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 DBIP07108 87 aaKnown RBP4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 FAM153BP0C7A2 387 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 CD79AP11912 226 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 PRG2P13727 222 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 ATF4P18848 351 aaPredicted RBP4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 GATA3P23771 443 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 PRTN3P24158 256 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 FPR2P25090 351 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 ZFP36P26651 326 aaKnown RBP4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 ALDH3A1P30838 453 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 CHI3L1P36222 383 aaPredicted RBP4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 MVKQ03426 396 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 EMX2Q04743 252 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 EGR4Q05215 589 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 MAD2L1Q13257 205 aaPredicted RBP4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 CASP8Q14790 479 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 MAPK11Q15759 364 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 CHI3L2Q15782 390 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 GSG1Q2KHT4 349 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 FBLN7Q53RD9 439 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 SPANXN4Q5MJ08 99 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 PHYHD1Q5SRE7 291 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 AVPI1Q5T686 147 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 GKAP1Q5VSY0 366 aaPredicted RBP4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 ANXA8L1Q5VT79 327 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 WBP2NLQ6ICG8 309 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF836Q6ZNA1 936 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 C8orf86Q6ZUL3 223 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 DOK3Q7L591 496 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 ZNF627Q7L945 461 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 RNF130Q86XS8 419 aa4.37□□□□□ -1.71
SNRNP40-204ENST00000474025 VRK2Q86Y07 508 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms