RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 WDR93Q6P2C0 686 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 KLHL17Q6TDP4 642 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 ZNF836Q6ZNA1 936 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 LRRC74BQ6ZQY2 392 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 TUBA1AQ71U36 451 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 LINGO2Q7L985 606 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 AAED1Q7RTV5 226 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 HIPK1Q86Z02 1210 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 ZBTB34Q8NCN2 500 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 OR52P1PQ8NH57 321 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 PIGXQ8TBF5 258 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC25A43Q8WUT9 341 aaPredicted RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC38A5Q8WUX1 472 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 WDR60Q8WVS4 1066 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 MAL2Q969L2 176 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 VPS33AQ96AX1 596 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 DACT3Q96B18 629 aaPredicted RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 C3orf49Q96BT1 292 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC25A36Q96CQ1 311 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 DDIT4LQ96D03 193 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 FBXO17Q96EF6 278 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 ZHX1-C8orf76Q96EF9 292 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 ADAD1Q96M93 576 aaKnown RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 CCDC115Q96NT0 180 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 ZIM3Q96PE6 472 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 TRNT1Q96Q11 434 aaKnown RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 TNFRSF13CQ96RJ3 184 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 NAA11Q9BSU3 229 aaPredicted RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 RSPO3Q9BXY4 272 aaPredicted RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 EXOSC3Q9NQT5 275 aaKnown RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 SLC17A5Q9NRA2 495 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 POLE3Q9NRF9 147 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 FAIMQ9NVQ4 179 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 AIG1Q9NVV5 245 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 ADPRHL2Q9NX46 363 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 EMC3Q9P0I2 261 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 SEC14L4Q9UDX3 406 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 HAO1Q9UJM8 370 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 MGAT4BQ9UQ53 548 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 CHST2Q9Y4C5 530 aa4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 SPIN1Q9Y657 262 aaPredicted RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 NSD1Q96L73 2696 aaPredicted RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 ANK3Q12955 4377 aaKnown RBP4.09□□□□□ -1.75
GTF3C3-208ENST00000455546 ZANQ9Y493 2812 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM120BA0PK00 339 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 SH3PXD2BA1X283 911 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 CDHR4A6H8M9 788 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 RFXANKO14593 260 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 TM9SF1O15321 606 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 ZNF208O43345 1280 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 TLX2O43763 284 aaPredicted RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 CUBNO60494 3623 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 EIF1BO60739 113 aaKnown RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 UPK3AO75631 287 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 DYSFO75923 2080 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 KRT33AO76009 404 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 ANP32DO95626 131 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 TSPAN15O95858 294 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 LGI1O95970 557 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 BCHEP06276 602 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 GPIP06744 558 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 DBIP07108 87 aaKnown RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 TFPTP0C1Z6 253 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 RPS4Y1P22090 263 aaKnown RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 CBLP22681 906 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 FKBP2P26885 142 aaKnown RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 MPGP29372 298 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 APOBEC3AP31941 199 aaPredicted RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 HTR3AP46098 478 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 RPS5P46782 204 aaKnown RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 SELENOPP49908 381 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 P2RY4P51582 365 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 PRPS1P60891 318 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 CARTPTQ16568 116 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 NRF1Q16656 503 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 TMEM249Q2WGJ8 235 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 CHRFAM7AQ494W8 412 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 ATG16L1Q676U5 607 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 CYB5R2Q6BCY4 276 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 NIPAL3Q6P499 406 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 ANKRD16Q6P6B7 361 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 PODNL1Q6PEZ8 512 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 PAQR6Q6TCH4 344 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 CLEC2AQ6UVW9 174 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 IL17RELQ6ZVW7 336 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 CREB3L2Q70SY1 520 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 MAVSQ7Z434 540 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 SPATA19Q7Z5L4 167 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 SERPINA11Q86U17 422 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 EPHX4Q8IUS5 362 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 PHC2Q8IXK0 858 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 PEX5LQ8IYB4 626 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 ZCCHC24Q8N2G6 241 aaKnown RBP4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 MREGQ8N565 214 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 TRIML2Q8N7C3 387 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 OR9K2Q8NGE7 335 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 OR9I1Q8NGQ6 314 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 SPATA3Q8NHX4 192 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 PMM1Q92871 262 aa4.08□□□□□ -1.76
GTF3C3-208ENST00000455546 GCDHQ92947 438 aaPredicted RBP4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms