RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 ASB4Q9Y574 426 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ATG2AQ2TAZ0 1938 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 A0A1W2PP55 124 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 CARNS1A5YM72 827 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 GFYI3L273 518 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 SURF4O15260 269 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 SUSD5O60279 629 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 CDC40O60508 579 aaKnown RBP eCLIP8.11□□□□□ -1.11
RTN4-206ENST00000394611 LGI1O95970 557 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 EPXP11678 715 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 PIPP12273 146 aaPredicted RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 HIST1H1CP16403 213 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 ZNF273Q14593 569 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ZNF620Q6ZNG0 422 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 BPIFB2Q8N4F0 458 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 DUSP18Q8NEJ0 188 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 OR4C16Q8NGL9 310 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 CNRIP1Q96F85 164 aaPredicted RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 SPSB2Q99619 263 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 DPYSL5Q9BPU6 564 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 RXFP3Q9NSD7 469 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 PCDHB10Q9UN67 800 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 COL4A4P53420 1690 aaPredicted RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 A0A1W2PR48 441 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 TMEM82A0PJX8 343 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 TRAPPC13A5PLN9 417 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 MED6O75586 246 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 SLC2A5P22732 501 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 MAOBP27338 520 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 C1orf61Q13536 156 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 NKAPLQ5M9Q1 402 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ENPP7Q6UWV6 458 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 Q7L0L9 218 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 OR5K2Q8NHB8 316 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 PPP1R14AQ96A00 147 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 RGCCQ9H4X1 137 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 TMEM45AQ9NWC5 275 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 DNAH14Q0VDD8 3507 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 A0A1W2PPC1 479 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ACOT7O00154 380 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 TGM5O43548 720 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 MTRF1O75570 445 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 CSTAP01040 98 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 NMBP08949 121 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ADRB3P13945 408 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 EPCAMP16422 314 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 HMGA1P17096 107 aaKnown RBP8.11□□□□□ -1.11
RTN4-206ENST00000394611 S100A2P29034 98 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 BTG1P62324 171 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 PEA15Q15121 130 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 BATFQ16520 125 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 DUSP5Q16690 384 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ZNF805Q5CZA5 627 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 NCMAPQ5T1S8 102 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 OR52W1Q6IF63 320 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ZNF529Q6P280 563 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 TRAM1L1Q8N609 369 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 CCDC107Q8WV48 283 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 IRF7Q92985 503 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 ZBTB8AQ96BR9 441 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 C1QTNF2Q9BXJ5 285 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 OR8D2Q9GZM6 311 aa8.11□□□□□ -1.11
RTN4-206ENST00000394611 PRUNE2Q8WUY3 3088 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 EFCAB7A8K855 629 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 SHOXO15266 292 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 FZD6O60353 706 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 HOXD4P09016 255 aaPredicted RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 SPP1P10451 314 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ITGB7P26010 798 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ASCL1P50553 236 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 PLA1AQ53H76 456 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 MANEAQ5SRI9 462 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 NIPAL3Q6P499 406 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 MARCH3Q86UD3 253 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 GLB1L2Q8IW92 636 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 TTLQ8NG68 377 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 OR4K14Q8NGD5 310 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 OR1J2Q8NGS2 313 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 RNASE11Q8TAA1 199 aaKnown RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 CMBLQ96DG6 245 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 DNTTIP1Q9H147 329 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 GHITMQ9H3K2 345 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 PNO1Q9NRX1 252 aaKnown RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 ASIC5Q9NY37 505 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ZNF443Q9Y2A4 671 aaPredicted RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 HIF3AQ9Y2N7 669 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 PCDHGA5Q9Y5G8 931 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 PLXNA3P51805 1871 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ROS1P08922 2347 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 MEIKINA0A087WXM9 373 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 DUXAA6NLW8 204 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ZNF736B4DX44 427 aaPredicted RBP8.1□□□□□ -1.11
RTN4-206ENST00000394611 MCRIP1C9JLW8 97 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 H7C1Q1 480 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 STK25O00506 426 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 AKR7A3O95154 331 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ZNF205O95201 554 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 CALCBP10092 127 aa8.1□□□□□ -1.11
RTN4-206ENST00000394611 ZP3P21754 424 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms