RNA–Protein interactions for RNA: ENST00000379340.9

POLR2J3-201, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,598 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-201ENST00000379340 SELENOFO60613 162 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 CPNE3O75131 537 aaKnown RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 CER1O95813 267 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 IGHMP01871 453 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 TACSTD2P09758 323 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 CDKN2AP42771 156 aaKnown RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 EVX1P49640 407 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 TMED10P49755 219 aaKnown RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 BLVRAP53004 296 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 EMP2P54851 167 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 E2F1Q01094 437 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 TRA2AQ13595 282 aaKnown RBP eCLIP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 MFSD13AQ14CX5 517 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 QPRTQ15274 297 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 BAK1Q16611 211 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 ACSM3Q53FZ2 586 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 PYDC2Q56P42 97 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF385CQ66K41 422 aaPredicted RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 PWWP2BQ6NUJ5 590 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 CNIH2Q6PI25 160 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 FAM220AQ7Z4H9 259 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 LRRC28Q86X40 367 aaPredicted RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 ASCC3Q8N3C0 2202 aaKnown RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 APCDD1LQ8NCL9 501 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 ARID1BQ8NFD5 2236 aaPredicted RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 TTC9Q92623 222 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 GHSRQ92847 366 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 ZC3H10Q96K80 434 aaKnown RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 DEPDC7Q96QD5 511 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 TSPAN32Q96QS1 320 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 RTN4RQ9BZR6 473 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 SLC22A4Q9H015 551 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 GAREM1Q9H706 876 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 RPRD1BQ9NQG5 326 aaKnown RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 ASH1LQ9NR48 2969 aaKnown RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 GNG8Q9UK08 70 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 NXT1Q9UKK6 140 aaKnown RBP9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 KLK13Q9UKR3 277 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 TMED7Q9Y3B3 224 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 TMEM14AQ9Y6G1 99 aa9.5□□□□□ -0.89
POLR2J3-201ENST00000379340 RP1P56715 2156 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 ARPC4-TTLL3A0A0A6YYG9 625 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 A0A1W2PQ09 198 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 TMEM8BA6NDV4 472 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 PATE3B3GLJ2 98 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 SUSD5O60279 629 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 HPGDSO60760 199 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 NPIPB7O75200 414 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 AHSA1O95433 338 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 CSF3P09919 207 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 UCHL1P09936 223 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 FGF5P12034 268 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 RAB3BP20337 219 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 EDNRAP25101 427 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 AZGP1P25311 298 aaKnown RBP9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 SHC1P29353 583 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 ACVR1BP36896 505 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 RPS5P46782 204 aaKnown RBP9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 MAP2K6P52564 334 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 CAV3P56539 151 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 C17orf67Q0P5P2 114 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 IL11RAQ14626 422 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 INSL4Q14641 139 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 GXYLT1Q4G148 440 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 ZMAT1Q5H9K5 638 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 SFXN4Q6P4A7 337 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 PAPD4Q6PIY7 484 aaKnown RBP9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 TMEM205Q6UW68 189 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 CPEB2Q7Z5Q1 589 aaKnown RBP9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 DEFB124Q8NES8 71 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 OR51L1Q8NGJ5 315 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 ZPLD1Q8TCW7 415 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 RNF138Q8WVD3 245 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 PPP1R3EQ9H7J1 279 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 MARCH7Q9H992 704 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 TIGARQ9NQ88 270 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 INIPQ9NRY2 104 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 RABL2AQ9UBK7 228 aaPredicted RBP9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 RABL2BQ9UNT1 228 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 PCDHGA5Q9Y5G8 931 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 MPDZO75970 2070 aa9.49□□□□□ -0.89
POLR2J3-201ENST00000379340 TRBV2A0A0J9YWF9 115 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 TMEM72A0PK05 275 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 SMIM30A4D0T7 59 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 FAM25AB3EWG3 89 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 FAM25CB3EWG5 89 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 FAM25GB3EWG6 89 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 ZNF879B4DU55 563 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 XKRYO14609 159 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 CDX4O14627 284 aaPredicted RBP9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 PDCD5O14737 125 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 NCR1O76036 304 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 CFIP05156 583 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 F13BP05160 661 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 SLC2A2P11168 524 aaPredicted RBP9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 SPNP16150 400 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 MSX1P28360 303 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 RBMS1P29558 406 aaKnown RBP9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 TALDO1P37837 337 aa9.48□□□□□ -0.89
POLR2J3-201ENST00000379340 APOBEC1P41238 236 aaKnown RBP9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 77.6 ms