RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 CD3EP07766 207 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 SMIM11AP58511 58 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 PRPS1P60891 318 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 DGCR6Q14129 220 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 KEAP1Q14145 624 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 TMEM108Q6UXF1 575 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 SLC46A3Q7Z3Q1 461 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 TMEM123Q8N131 208 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 MAGEE2Q8TD90 523 aaPredicted RBP16.27■□□□□ 0.2
CHTOP-202ENST00000368687 MBD6Q96DN6 1003 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 BPIFA2Q96DR5 249 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 PYURFQ96I23 114 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 TMEM204Q9BSN7 226 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 NDEL1Q9GZM8 345 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 MGAT4BQ9UQ53 548 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 RNF115Q9Y4L5 304 aa16.27■□□□□ 0.2
CHTOP-202ENST00000368687 PRR14LQ5THK1 2151 aa16.27■□□□□ 0.19
CHTOP-202ENST00000368687 TEP1Q99973 2627 aaKnown RBP16.26■□□□□ 0.19
CHTOP-202ENST00000368687 A0A1W2PRG6 482 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 NPIPB13A6NJU9 1138 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 CENPBD1B2RD01 187 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 NPIPB4C9JG80 1138 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 LRRN3E7EW58 273 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 TMCC2O75069 709 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 STAMBPO95630 424 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 HPRP00739 348 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 FUT1P19526 365 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 DAP3P51398 398 aaKnown RBP16.26■□□□□ 0.19
CHTOP-202ENST00000368687 ROR2Q01974 943 aaKnown RBP16.26■□□□□ 0.19
CHTOP-202ENST00000368687 NCMAPQ5T1S8 102 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 ANKRD16Q6P6B7 361 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 ZNF730Q6ZMV8 503 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 ZNF704Q6ZNC4 412 aaPredicted RBP16.26■□□□□ 0.19
CHTOP-202ENST00000368687 CCDC36Q8IYA8 594 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 FAM156AQ8NDB6 213 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 OR6X1Q8NH79 312 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 PFN4Q8NHR9 129 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 NMNAT1Q9HAN9 279 aaPredicted RBP16.26■□□□□ 0.19
CHTOP-202ENST00000368687 SLC17A5Q9NRA2 495 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 TAS2R5Q9NYW4 299 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 ACTR3BQ9P1U1 418 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 TMEM5Q9Y2B1 443 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 SLC25A15Q9Y619 301 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 ROS1P08922 2347 aa16.26■□□□□ 0.19
CHTOP-202ENST00000368687 SLC35F4A4IF30 521 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 C11orf98E9PRG8 122 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 BLOC1S5-TXNDC5H3BN57 136 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 FFAR1O14842 300 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 UPK3AO75631 287 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 PRSS23O95084 383 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 H1F0P07305 194 aaKnown RBP16.25■□□□□ 0.19
CHTOP-202ENST00000368687 NR2C1P13056 603 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 HLA-DOBP13765 273 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 PTAFRP25105 342 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 LOXP28300 417 aaPredicted RBP16.25■□□□□ 0.19
CHTOP-202ENST00000368687 YAP1P46937 504 aaKnown RBP16.25■□□□□ 0.19
CHTOP-202ENST00000368687 SLC9A3P48764 834 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 UBE2NP61088 152 aaKnown RBP16.25■□□□□ 0.19
CHTOP-202ENST00000368687 TAF11Q15544 211 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 ALKBH2Q6NS38 261 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 ADAM5Q6NVV9 412 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 MBOAT2Q6ZWT7 520 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 SLC35D2Q76EJ3 337 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 C20orf196Q8IYI0 205 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 OR1K1Q8NGR3 316 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 OR52N5Q8NH56 324 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 PIGTQ969N2 578 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 PIP5K1AQ99755 562 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 CRLF2Q9HC73 371 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 MAN2C1Q9NTJ4 1040 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 C20orf141Q9NUB4 165 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 NDUFAF4Q9P032 175 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 ITGB1BP2Q9UKP3 347 aa16.25■□□□□ 0.19
CHTOP-202ENST00000368687 ALPK2Q86TB3 2170 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 ARPC4-TTLL3A0A0A6YYG9 625 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 ZNF99A8MXY4 864 aaPredicted RBP16.24■□□□□ 0.19
CHTOP-202ENST00000368687 J3KTA2 159 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 BCL10O95999 233 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 TSPAN19P0C672 248 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 SAGP10523 405 aaPredicted RBP16.24■□□□□ 0.19
CHTOP-202ENST00000368687 IFI30P13284 250 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 IFNGR1P15260 489 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 PRKCDQ05655 676 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 RPL18Q07020 188 aaKnown RBP16.24■□□□□ 0.19
CHTOP-202ENST00000368687 ACKR1Q16570 336 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 DNAL1Q4LDG9 190 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 C9orf135Q5VTT2 229 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 SEZ6L2Q6UXD5 910 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 NHLRC1Q6VVB1 395 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 LSRQ86X29 649 aaPredicted RBP16.24■□□□□ 0.19
CHTOP-202ENST00000368687 NRMQ8IXM6 262 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 LRRC17Q8N6Y2 441 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 OR6N1Q8NGY5 312 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 NRGNQ92686 78 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 ZNF566Q969W8 418 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 SLC25A44Q96H78 314 aaPredicted RBP16.24■□□□□ 0.19
CHTOP-202ENST00000368687 C7orf34Q96L11 122 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 HS3ST6Q96QI5 342 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 ALPK1Q96QP1 1244 aa16.24■□□□□ 0.19
CHTOP-202ENST00000368687 ZNF347Q96SE7 839 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms