RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 ONECUT1Q9UBC0 465 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 NLKQ9UBE8 527 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 COL9A3Q14050 684 aaPredicted RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 EMG1Q92979 244 aaKnown RBP11.23□□□□□ -0.61
PCF11-201ENST00000298281 RTP4Q96DX8 246 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 SLC25A18Q9H1K4 315 aa11.23□□□□□ -0.61
PCF11-201ENST00000298281 H3BVH4 76 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 LYRM1O43325 122 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 FUT1P19526 365 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 M6PRP20645 277 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 MFGE8Q08431 387 aaPredicted RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 CPZQ66K79 652 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 METAP1DQ6UB28 335 aaPredicted RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 TCEAL8Q8IYN2 117 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 DEDD2Q8WXF8 326 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 BORCS6Q96GS4 357 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 PLK3Q9H4B4 646 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 HHLA2Q9UM44 414 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 GPR32O75388 356 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 RPS5P46782 204 aaKnown RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 PXNP49023 591 aaPredicted RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 ERVPABLB-1P60509 514 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ZNF141Q15928 474 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 VWA2Q5GFL6 755 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 NXNL2Q5VZ03 156 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 PLPP5Q8NEB5 264 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 OR2T35Q8NGX2 323 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 LMO3Q8TAP4 145 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ASB17Q8WXJ9 295 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ZMYND19Q96E35 227 aaPredicted RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 LIN7BQ9HAP6 207 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 INIPQ9NRY2 104 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 TIMM9Q9Y5J7 89 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 UNC13CQ8NB66 2214 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 FCGR2AP12318 317 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 TCN2P20062 427 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 MBTPS1Q14703 1052 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 PLAG1Q6DJT9 500 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 PM20D1Q6GTS8 502 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 OR5A2Q8NGI9 324 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 TRMT61AQ96FX7 289 aaKnown RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 VN1R3Q9BXE9 311 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 SLC2A9Q9NRM0 540 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 COPS3Q9UNS2 423 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 KIAA1324LA8MWY0 1029 aaPredicted RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 ZNF587BE7ETH6 402 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 NUPL2O15504 423 aaKnown RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 ITGAMP11215 1152 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 CEACAM7Q14002 265 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 IRF4Q15306 451 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 RANBP10Q6VN20 620 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 NCCRP1Q6ZVX7 275 aaPredicted RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 CLECL1Q8IZS7 167 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 APCDD1Q8J025 514 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ANGPTL6Q8NI99 470 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ZBTB8AQ96BR9 441 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 TCTN2Q96GX1 697 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 VIRMAQ69YN4 1812 aaKnown RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 BMPR1BO00238 502 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 SNNO75324 88 aaPredicted RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 ERHP84090 104 aaKnown RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 NFATC3Q12968 1075 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 DGAT2L7PQ6IED9 249 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 SSX9Q7RTT3 188 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 NECAP1Q8NC96 275 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ADAMTS14Q8WXS8 1223 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ADAMTS6Q9UKP5 1117 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 URGCP-MRPS24S4R325 110 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 PRRG2O14669 202 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 PHOX2AO14813 284 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ARPC3O15145 178 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ELAVL4P26378 380 aaKnown RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 RGRP47804 291 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 SIGLECL1Q8N7X8 197 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 TFAP2CQ92754 450 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 EGLN3Q9H6Z9 239 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 RAB18Q9NP72 206 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 FAM212BQ9NTI7 297 aaPredicted RBP11.22□□□□□ -0.61
PCF11-201ENST00000298281 GAB2Q9UQC2 676 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 ZNF337Q9Y3M9 751 aa11.22□□□□□ -0.61
PCF11-201ENST00000298281 FANCMQ8IYD8 2048 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.21□□□□□ -0.61
PCF11-201ENST00000298281 DEGS1O15121 323 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 GABRA5P31644 462 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 TATDN3Q17R31 274 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 BTNL3Q6UXE8 466 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 ZNF546Q86UE3 836 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 CPOQ8IVL8 374 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 BTF3L4Q96K17 158 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 STACQ99469 402 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 MED18Q9BUE0 208 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 APOOQ9BUR5 198 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 SLA2Q9H6Q3 261 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 CHST11Q9NPF2 352 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 DMRT3Q9NQL9 472 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 CDHR4A6H8M9 788 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 NFYAP23511 347 aaPredicted RBP11.21□□□□□ -0.61
PCF11-201ENST00000298281 MGAT3Q09327 533 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 OR8G1Q15617 311 aa11.21□□□□□ -0.61
PCF11-201ENST00000298281 TMEM25Q86YD3 366 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms