RNA–Protein interactions for RNA: ENST00000273062.6

CTDSP1-201, Transcript of CTD small phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSP1, Length 2,638 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-201ENST00000273062 INPP5JQ15735 1006 aaPredicted RBP14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 MPPED2Q15777 294 aa14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 TMEM69Q5SWH9 247 aa14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 Q6ZVL8 140 aa14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 KDF1Q8NAX2 398 aaPredicted RBP14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 OR10D4PQ8NGN7 298 aa14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 RELTQ969Z4 430 aa14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 OR14A2Q96R54 314 aa14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 RHBGQ9H310 441 aa14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 MMP26Q9NRE1 261 aa14.4□□□□□ -0.1
CTDSP1-201ENST00000273062 TMEM202A6NGA9 273 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 H7C1Q1 480 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 MBP02144 154 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 ARG1P05089 322 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 SNRNP70P08621 437 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 CEBPBP17676 345 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 CDK2P24941 298 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 GPR4P46093 362 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 METAP1P53582 386 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 RPS13P62277 151 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 PJVKQ0ZLH3 352 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF345Q14585 488 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF77Q15935 545 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 ZNF239Q16600 458 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 C11orf87Q6NUJ2 197 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 DHRS11Q6UWP2 260 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 UBAC2Q8NBM4 344 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 C1orf216Q8TAB5 229 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 SEMA6CQ9H3T2 930 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 SGK2Q9HBY8 427 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 FOXJ3Q9UPW0 622 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 PPIL1Q9Y3C6 166 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 OR2AG2A6NM03 316 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 SOX15O60248 233 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 KLHL18O94889 574 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 IFNA2P01563 188 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 C6P13671 934 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 AGTR1P30556 359 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 PYCR1P32322 319 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 NUTF2P61970 127 aaKnown RBP14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 COL9A2Q14055 689 aaPredicted RBP14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 TRAM1Q15629 374 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 SYPL1Q16563 259 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 PCGF3Q3KNV8 242 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 PDZD11Q5EBL8 140 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 LYPLAL1Q5VWZ2 237 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 SDR9C7Q8NEX9 313 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 OR5AP2Q8NGF4 316 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 OR2G2Q8NGZ5 317 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 SPPL3Q8TCT6 385 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 AKR1E2Q96JD6 320 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 MRGPRX3Q96LB0 322 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 SELENOIQ9C0D9 397 aa14.39□□□□□ -0.11
CTDSP1-201ENST00000273062 GGT3PA6NGU5 568 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 PPM1DO15297 605 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 HOXB5P09067 269 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 HOXA5P20719 270 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 NME2P22392 152 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 PNLIPRP1P54315 467 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 DHCR24Q15392 516 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 RSU1Q15404 277 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 TMEM244Q5VVB8 128 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 YOD1Q5VVQ6 348 aaPredicted RBP14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 CARFQ8N187 725 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 STEAP2Q8NFT2 490 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 OR9A2Q8NGT5 310 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 TMEM100Q9NV29 134 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 GDE1Q9NZC3 331 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 CACFD1Q9UGQ2 172 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 TP53TG5Q9Y2B4 290 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 SLC27A6Q9Y2P4 619 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 KIF26AQ9ULI4 1882 aaPredicted RBP14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 SERTM1A2A2V5 107 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 CDHR4A6H8M9 788 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 CD74P04233 296 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 CD1CP29017 333 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 PPP2CBP62714 309 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 PPP2CAP67775 309 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 PIP5KL1Q5T9C9 394 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 PRR18Q8N4B5 295 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 LILRA3Q8N6C8 439 aaPredicted RBP14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 SYNPRQ8TBG9 265 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 GPR148Q8TDV2 347 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 PPP1R1CQ8WVI7 109 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 SLC39A7Q92504 469 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 DVL3Q92997 716 aaPredicted RBP14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 NEIL2Q969S2 332 aa14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 RIMS4Q9H426 269 aaPredicted RBP14.38□□□□□ -0.11
CTDSP1-201ENST00000273062 IGLV3-16A0A075B6K0 115 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 ADRB3P13945 408 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 DPP4P27487 766 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 SMIM11AP58511 58 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 TAS2R50P59544 299 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 ST8SIA6P61647 398 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 GFI1BQ5VTD9 330 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 ACOT7LQ6ZUV0 252 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 GLB1L2Q8IW92 636 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 AVL9Q8NBF6 648 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 RSPRY1Q96DX4 576 aa14.37□□□□□ -0.11
CTDSP1-201ENST00000273062 SLC6A16Q9GZN6 736 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms