RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 WDR76Q9H967 626 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 PPP4R1LQ9P1A2 415 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 CTSFQ9UBX1 484 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 KLK11Q9UBX7 282 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 PILRAQ9UKJ1 303 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 PLXND1Q9Y4D7 1925 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 SUSD5O60279 629 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 SIX6O95475 246 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 TDGQ13569 410 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 TRAM1Q15629 374 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 LIN54Q6MZP7 749 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 RPL22L1Q6P5R6 122 aaKnown RBP11.46□□□□□ -0.57
UBXN4-201ENST00000272638 TMEM41AQ96HV5 264 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 SIGLEC11Q96RL6 698 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 METTL17Q9H7H0 456 aaPredicted RBP11.46□□□□□ -0.57
UBXN4-201ENST00000272638 ANKRD10Q9NXR5 420 aa11.46□□□□□ -0.57
UBXN4-201ENST00000272638 CGGBP1Q9UFW8 167 aaPredicted RBP11.46□□□□□ -0.57
UBXN4-201ENST00000272638 A0A087WV62 115 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF726A6NNF4 738 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 POM121CA8CG34 1229 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 NKX2-2O95096 273 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 TCRBP04435 133 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 RRAS2P62070 204 aaPredicted RBP11.46□□□□□ -0.58
UBXN4-201ENST00000272638 POU4F3Q15319 338 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 AKIRIN2Q53H80 203 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 CD300LDQ6UXZ3 194 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 KCTD9Q7L273 389 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 ARMC10Q8N2F6 343 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 OR2AJ1Q8NGZ0 328 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 OR52I2Q8NH67 350 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 OR1F2PQ96R84 312 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 WDR77Q9BQA1 342 aaPredicted RBP11.46□□□□□ -0.58
UBXN4-201ENST00000272638 TTYH1Q9H313 450 aaPredicted RBP11.46□□□□□ -0.58
UBXN4-201ENST00000272638 MCCC2Q9HCC0 563 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 KCNG2Q9UJ96 466 aa11.46□□□□□ -0.58
UBXN4-201ENST00000272638 TLCD2A6NGC4 264 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 TRIM3O75382 744 aaPredicted RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 IGHV4-34P06331 123 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 LCN1P31025 176 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 EVI2BP34910 448 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF41P51814 821 aaPredicted RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 RIDAP52758 137 aaKnown RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 THOC7Q6I9Y2 204 aaKnown RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 KCTD18Q6PI47 426 aaPredicted RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 GPR148Q8TDV2 347 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 RBP7Q96R05 134 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 LPAR4Q99677 370 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 ADGRL4Q9HBW9 690 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 SDHAF3Q9NRP4 125 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 COPS3Q9UNS2 423 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 PLEKHA6Q9Y2H5 1048 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 TRABD2BA6NFA1 517 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 L7N2F9 121 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 HRGP04196 525 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 CDKN2AP42771 156 aaKnown RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 ARFRP1Q13795 201 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 DPY19L2P2Q6ZN68 376 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 OR13C3Q8NGS6 347 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 GPBAR1Q8TDU6 330 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 C3orf49Q96BT1 292 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 UPRTQ96BW1 309 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 FAM71F1Q96KD3 344 aaPredicted RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 OR5B2Q96R09 309 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 OR6C1Q96RD1 312 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 NRIP3Q9NQ35 241 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 MED29Q9NX70 200 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 COMMD9Q9P000 198 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 TRBV11-1A0A0K0K1C0 115 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 BHLHE40O14503 412 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 BCAT2O15382 392 aaPredicted RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 SEC14L5O43304 696 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 NSA2O95478 260 aaKnown RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 TFP02787 698 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 ALDOBP05062 364 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 CFL1P23528 166 aaKnown RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 MAPK3P27361 379 aaPredicted RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 FXYD6P3P58550 94 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 HSD11B2P80365 405 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 HSF2Q03933 536 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 GPR50Q13585 617 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 NPSR1Q6W5P4 371 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 NDUFAF7Q7L592 441 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 PPP1R14AQ96A00 147 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 SPACA5Q96QH8 159 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 SDHCQ99643 169 aaPredicted RBP11.45□□□□□ -0.58
UBXN4-201ENST00000272638 KCNK15Q9H427 330 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 EPHA6Q9UF33 1036 aa11.45□□□□□ -0.58
UBXN4-201ENST00000272638 TRAPPC6AO75865 159 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 HCKP08631 526 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF20P17024 532 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 EMP2P54851 167 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 CAMK2DQ13557 499 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 CDK5R1Q15078 307 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 EEF1A1P5Q5VTE0 462 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 CD163Q86VB7 1156 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF440Q8IYI8 595 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 CMTM4Q8IZR5 234 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 OR2I1PQ8NGU4 316 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 ZNF417Q8TAU3 575 aa11.44□□□□□ -0.58
UBXN4-201ENST00000272638 SLC25A44Q96H78 314 aaPredicted RBP11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms