RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 PDCD1LG2Q9BQ51 273 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ALG12Q9BV10 488 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 PPIL3Q9H2H8 161 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 TMEM9BQ9NQ34 198 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 FBXO8Q9NRD0 319 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ACOXLQ9NUZ1 547 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 C14orf119Q9NWQ9 140 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 NDUFB11Q9NX14 153 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 BABAM2Q9NXR7 383 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 COMMD3Q9UBI1 195 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 IKZF2Q9UKS7 526 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 TCFL5Q9UL49 500 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 ZMIZ1Q9ULJ6 1067 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 STUB1Q9UNE7 303 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 EXOGQ9Y2C4 368 aaKnown RBP3.11□□□□□ -1.91
LIG4-205ENST00000614526 ZFHX4Q86UP3 3567 aa3.11□□□□□ -1.91
LIG4-205ENST00000614526 FREM3P0C091 2139 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 TRAV36DV7A0A075B6V5 113 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 IGHV3-15A0A0B4J1V0 119 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 TMEM129A0AVI4 362 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 METTL15A6NJ78 407 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 A8MVM7 634 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 PRR32B1ATL7 298 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 GABRPO00591 440 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 XKRYO14609 159 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 ADAM10O14672 748 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 AKAP8O43823 692 aaKnown RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 SLC16A7O60669 478 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 TNFSF15O95150 251 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 MT-CO3P00414 261 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 BGLAPP02818 100 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 OR8G3PP0DMU2 310 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 CPEP16870 476 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 SLC2A5P22732 501 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 CALRP27797 417 aaKnown RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 S100A5P33763 92 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 ZNF41P51814 821 aaPredicted RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 POU3F1Q03052 451 aaPredicted RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 Q0VFX4 171 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 TRA2AQ13595 282 aaKnown RBP eCLIP3.1□□□□□ -1.91
LIG4-205ENST00000614526 EFR3AQ14156 821 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 CARTPTQ16568 116 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 TMEM176BQ3YBM2 270 aaPredicted RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 ZMAT1Q5H9K5 638 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 PLA2G2CQ5R387 149 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 FAM69AQ5T7M9 428 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 AP1ARQ63HQ0 302 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 PLXDC2Q6UX71 529 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 MAMDC2Q7Z304 686 aaPredicted RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 GRINAQ7Z429 371 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 LAX1Q8IWV1 398 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 SLC35F2Q8IXU6 374 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 UBQLNLQ8IYU4 475 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 RDH10Q8IZV5 341 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 FAM83FQ8NEG4 500 aaPredicted RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 NUBPLQ8TB37 319 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 SLC22A8Q8TCC7 542 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 NSMAFQ92636 917 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 HGDQ93099 445 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 BORCS5Q969J3 196 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 SPACA9Q96E40 222 aaPredicted RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 ADAD1Q96M93 576 aaKnown RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 NKX3-1Q99801 234 aaPredicted RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 PTDSS2Q9BVG9 487 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 STRADBQ9C0K7 418 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 PARD6AQ9NPB6 346 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 BRD7Q9NPI1 651 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 EXOSC3Q9NQT5 275 aaKnown RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 MRPS18AQ9NVS2 196 aaKnown RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 IL17BQ9UHF5 180 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 FARSAQ9Y285 508 aaKnown RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 HIF3AQ9Y2N7 669 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 KLHDC2Q9Y2U9 406 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 MED13Q9UHV7 2174 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 MGAQ8IWI9 3026 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 A0A0G2JMM0 328 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 A0A1W2PPB8 328 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 A0A1W2PQD3 144 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 A0A1W2PRS3 328 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 KIR3DP1A8MWS1 328 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 RAMP1O60894 148 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 IGHA1P01876 353 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 IFNGR1P15260 489 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 SDHAP31040 664 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 SOX6P35712 828 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 DLSTP36957 453 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 PTGDSP41222 190 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 EIF1AXP47813 144 aaKnown RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 SOX2P48431 317 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 OR10A3P58181 314 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 RPS4XP62701 263 aaKnown RBP3.1□□□□□ -1.91
LIG4-205ENST00000614526 TLE3Q04726 772 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 GALEQ14376 348 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 ZSWIM7Q19AV6 140 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 VASNQ6EMK4 673 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 LYPD8Q6UX82 237 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 LINC00696Q6ZRV3 163 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 FAM122BQ7Z309 247 aa3.1□□□□□ -1.91
LIG4-205ENST00000614526 CEACAM19Q7Z692 300 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms