RNA–Protein interactions for RNA: ENST00000593764.5

SHKBP1-202, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 870 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-202ENST00000593764 GMNCA6NCL1 334 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 ZNF587BE7ETH6 402 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 NME4O00746 187 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 PLPP3O14495 311 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 ABCD4O14678 606 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 SHOX2O60902 331 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 KRT33AO76009 404 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 MT-ATP6P00846 226 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 IFNA14P01570 189 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 CD40P25942 277 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 OR1E2P47887 323 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 PMS2P3Q13401 168 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 HIKESHIQ53FT3 197 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 CYBRD1Q53TN4 286 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 SHEQ5VZ18 495 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 TTC33Q6PID6 262 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 HACD2Q6Y1H2 254 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 ARPINQ7Z6K5 226 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 WDFY1Q8IWB7 410 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 TMEM123Q8N131 208 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 FBXW5Q969U6 566 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 MPP4Q96JB8 637 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 OR2M2Q96R28 347 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 HOPXQ9BPY8 73 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 ASPNQ9BXN1 380 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 GSX2Q9BZM3 304 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 AP3M1Q9Y2T2 418 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 AMDHD2Q9Y303 409 aa16.19■□□□□ 0.18
SHKBP1-202ENST00000593764 HEATR1Q9H583 2144 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 RPL36A-HNRNPH2H7BZ11 118 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 SOD3P08294 240 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 NQO1P15559 274 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 PAX1P15863 534 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 PTAFRP25105 342 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 SLC7A2P52569 658 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 SELENOWP63302 87 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 LIPEQ05469 1076 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 PUDPQ08623 228 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 ZNF74Q16587 644 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 PGGHGQ32M88 737 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 LRRC23Q53EV4 343 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 C1QTNF12Q5T7M4 302 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 TMEM108Q6UXF1 575 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 UEVLDQ8IX04 471 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 C10orf53Q8N6V4 93 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 OR1K1Q8NGR3 316 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 OR5J2Q8NH18 312 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 SMAP2Q8WU79 429 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 BCL2L2Q92843 193 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 ZNF837Q96EG3 531 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 PERPQ96FX8 193 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 TXNDC15Q96J42 360 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 MEPEQ9NQ76 525 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 ZNF701Q9NV72 531 aaPredicted RBP16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 LAMP3Q9UQV4 416 aa16.18■□□□□ 0.18
SHKBP1-202ENST00000593764 M0R1B8 84 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 OVOL3O00110 214 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 SLC43A1O75387 559 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 CH25HO95992 272 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 PTH2RP49190 550 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 PRPS1P60891 318 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 IL1RL1Q01638 556 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 ROR2Q01974 943 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 SPOCK1Q08629 439 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 PIN1Q13526 163 aaPredicted RBP16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 PHYHD1Q5SRE7 291 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 KLHL17Q6TDP4 642 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 PXKQ7Z7A4 578 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 CPLX4Q7Z7G2 160 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 NKAIN4Q8IVV8 208 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 LRRC17Q8N6Y2 441 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 ANKK1Q8NFD2 765 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 TMEM171Q8WVE6 324 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 RADILQ96JH8 1075 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 EMC6Q9BV81 110 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 SLC19A3Q9BZV2 496 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 NELFAQ9H3P2 528 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 MED29Q9NX70 200 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 TAS2R5Q9NYW4 299 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 CISD1Q9NZ45 108 aaKnown RBP16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 RIMS3Q9UJD0 308 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 NOX1Q9Y5S8 564 aa16.17■□□□□ 0.18
SHKBP1-202ENST00000593764 KPNA4O00629 521 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 ARHGEF9O43307 516 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 TMCC2O75069 709 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 OR5F1O95221 314 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 CD8AP01732 235 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 NUDT2P50583 147 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 POU3F1Q03052 451 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 TBRG1Q3YBR2 411 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 Q5PR19 223 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 HMBOX1Q6NT76 420 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 PRSS57Q6UWY2 283 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 DEF8Q6ZN54 512 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 C20orf196Q8IYI0 205 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 MAGEE2Q8TD90 523 aaPredicted RBP16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 CMTM5Q96DZ9 223 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 TPD52L3Q96J77 140 aa16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 POLR2J2Q9GZM3 115 aaKnown RBP16.16■□□□□ 0.18
SHKBP1-202ENST00000593764 POLR2J3Q9H1A7 115 aaKnown RBP16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 180.3 ms