RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 HOXB9P17482 250 aaPredicted RBP14.99□□□□□ -0.01
RETREG3-210ENST00000590541 ACAA2P42765 397 aaKnown RBP14.99□□□□□ -0.01
RETREG3-210ENST00000590541 TBRG1Q3YBR2 411 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 GTDC1Q4AE62 458 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 PDLIM3Q53GG5 364 aaPredicted RBP14.99□□□□□ -0.01
RETREG3-210ENST00000590541 PRR31Q5SQ13 230 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 ANKRD16Q6P6B7 361 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 SLC2A7Q6PXP3 512 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 PAQR6Q6TCH4 344 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 ZNF836Q6ZNA1 936 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 PEG10Q86TG7 708 aaKnown RBP14.99□□□□□ -0.01
RETREG3-210ENST00000590541 VRK2Q86Y07 508 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 FUNDC1Q8IVP5 155 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 ZIC4Q8N9L1 334 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 UBASH3BQ8TF42 649 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 ZNF418Q8TF45 676 aaPredicted RBP14.99□□□□□ -0.01
RETREG3-210ENST00000590541 CKAP2Q8WWK9 683 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 TMEM45BQ96B21 275 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 EBF4Q9BQW3 602 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 SIKE1Q9BRV8 207 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 PIF1Q9H611 641 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 SEC61A2Q9H9S3 476 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 RLIMQ9NVW2 624 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 CCDC167Q9P0B6 97 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 CRNNQ9UBG3 495 aaPredicted RBP14.99□□□□□ -0.01
RETREG3-210ENST00000590541 FBXO9Q9UK97 447 aaPredicted RBP14.99□□□□□ -0.01
RETREG3-210ENST00000590541 SPEF1Q9Y4P9 236 aa14.99□□□□□ -0.01
RETREG3-210ENST00000590541 TMEM129A0AVI4 362 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 TMEM72A0PK05 275 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 C5orf58C9J3I9 102 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 hCG_2039718K7EN88 272 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 GPIP06744 558 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 CECR9P0C854 216 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 H2AFXP16104 143 aaPredicted RBP14.98□□□□□ -0.01
RETREG3-210ENST00000590541 CCNA2P20248 432 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 HILS1P60008 231 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 ZNF311Q5JNZ3 666 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 SVOPLQ8N434 492 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 NUP37Q8NFH4 326 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 OR1K1Q8NGR3 316 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 ZNF385AQ96PM9 386 aaKnown RBP14.98□□□□□ -0.01
RETREG3-210ENST00000590541 HIF1ANQ9NWT6 349 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 PCDHB10Q9UN67 800 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 TRIM33Q9UPN9 1127 aa14.98□□□□□ -0.01
RETREG3-210ENST00000590541 A8MVM7 634 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 TRIM77I1YAP6 450 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 NR5A2O00482 541 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 IGLV1-44P01699 117 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 ERCC1P07992 297 aaPredicted RBP14.97□□□□□ -0.01
RETREG3-210ENST00000590541 NCF2P19878 526 aaPredicted RBP14.97□□□□□ -0.01
RETREG3-210ENST00000590541 THBS4P35443 961 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 ARFIP2P53365 341 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 TUBA1BP68363 451 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 TUBA4AP68366 448 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 HGFACQ04756 655 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 ADRM1Q16186 407 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 USP43Q70EL4 1123 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 TUBA1AQ71U36 451 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 KRT73Q86Y46 540 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 POMGNT2Q8NAT1 580 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 BHLHE22Q8NFJ8 381 aaPredicted RBP14.97□□□□□ -0.01
RETREG3-210ENST00000590541 OR4F15Q8NGB8 312 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 TMEM186Q96B77 213 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 SPATA5L1Q9BVQ7 753 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 SF3B5Q9BWJ5 86 aaKnown RBP14.97□□□□□ -0.01
RETREG3-210ENST00000590541 ZNF442Q9H7R0 627 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 SLC52A3Q9NQ40 469 aa14.97□□□□□ -0.01
RETREG3-210ENST00000590541 ARPC4-TTLL3A0A0A6YYG9 625 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 EVPLLA8MZ36 301 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 LGI1O95970 557 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 GKN3PP0CG01 181 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 GPX2P18283 190 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 NPR2P20594 1047 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 C3orf36Q3SXR2 165 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 AGKQ53H12 422 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 AWAT1Q58HT5 328 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 REEP3Q6NUK4 255 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 THSD4Q6ZMP0 1018 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 AAED1Q7RTV5 226 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 SPATA21Q7Z572 469 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 MYPOPQ86VE0 399 aaPredicted RBP14.96□□□□□ -0.01
RETREG3-210ENST00000590541 CLIP4Q8N3C7 705 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 CADM2Q8N3J6 435 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 TSPEARQ8WU66 669 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 BCL2L2Q92843 193 aaPredicted RBP14.96□□□□□ -0.01
RETREG3-210ENST00000590541 RBM4Q9BWF3 364 aaKnown RBP14.96□□□□□ -0.01
RETREG3-210ENST00000590541 TAPBPLQ9BX59 468 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 TMEM38AQ9H6F2 299 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 EVA1AQ9H8M9 152 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 MRGBPQ9NV56 204 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 SLC25A37Q9NYZ2 338 aa14.96□□□□□ -0.01
RETREG3-210ENST00000590541 PKD1L1Q8TDX9 2849 aa14.96□□□□□ -0.02
RETREG3-210ENST00000590541 TGP01266 2768 aa14.96□□□□□ -0.02
RETREG3-210ENST00000590541 SH3PXD2BA1X283 911 aa14.95□□□□□ -0.02
RETREG3-210ENST00000590541 PRORSD1PA6NEY8 169 aa14.95□□□□□ -0.02
RETREG3-210ENST00000590541 LIPT2A6NK58 231 aa14.95□□□□□ -0.02
RETREG3-210ENST00000590541 VAMP5O95183 116 aa14.95□□□□□ -0.02
RETREG3-210ENST00000590541 ARAFP10398 606 aa14.95□□□□□ -0.02
RETREG3-210ENST00000590541 PAX7P23759 505 aa14.95□□□□□ -0.02
RETREG3-210ENST00000590541 PRKAR1BP31321 381 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 358.3 ms