RNA–Protein interactions for RNA: ENST00000587776.1

HDAC5-206, Transcript of histone deacetylase 5, humanhuman

TSL 3

Gene HDAC5, Length 917 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-206ENST00000587776 MAPK11Q15759 364 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 ZNF311Q5JNZ3 666 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 CEP85LQ5SZL2 805 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 NXNQ6DKJ4 435 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 GLB1L3Q8NCI6 653 aaPredicted RBP13.1□□□□□ -0.31
HDAC5-206ENST00000587776 PIK3C3Q8NEB9 887 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 ANKK1Q8NFD2 765 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 SLC38A5Q8WUX1 472 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 TMEM19Q96HH6 336 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 OXGR1Q96P68 337 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 CENPHQ9H3R5 247 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 NOX3Q9HBY0 568 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 KCNK9Q9NPC2 374 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 SLC6A13Q9NSD5 602 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 SEC14L4Q9UDX3 406 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 METRNQ9UJH8 293 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 HAO1Q9UJM8 370 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 IFT52Q9Y366 437 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 NOX1Q9Y5S8 564 aa13.1□□□□□ -0.31
HDAC5-206ENST00000587776 A0A0G2JPF8 293 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 HNRNPCL2B2RXH8 293 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 HNRNPCL3B7ZW38 293 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 FTCDNL1E5RQL4 147 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 HNRNPCL1O60812 293 aaKnown RBP13.09□□□□□ -0.31
HDAC5-206ENST00000587776 ZNF432O94892 652 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 IL6P05231 212 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 HNRNPCL4P0DMR1 293 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 CD79AP11912 226 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 EPHA3P29320 983 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 DVL1P1P54792 670 aaPredicted RBP13.09□□□□□ -0.31
HDAC5-206ENST00000587776 HOXC5Q00444 222 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 RIN1Q13671 783 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 CARD17Q5XLA6 110 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 GLCCI1Q86VQ1 547 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 MEX3DQ86XN8 651 aaKnown RBP13.09□□□□□ -0.31
HDAC5-206ENST00000587776 CCDC36Q8IYA8 594 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 IL17RDQ8NFM7 739 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 KTI12Q96EK9 354 aaPredicted RBP13.09□□□□□ -0.31
HDAC5-206ENST00000587776 PTDSS2Q9BVG9 487 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 NARFLQ9H6Q4 476 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 WDR55Q9H6Y2 383 aaPredicted RBP13.09□□□□□ -0.31
HDAC5-206ENST00000587776 RMND5AQ9H871 391 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 TPT1P8Q9HAU6 139 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 THUMPD1Q9NXG2 353 aaKnown RBP13.09□□□□□ -0.31
HDAC5-206ENST00000587776 SPEF1Q9Y4P9 236 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 GPR45Q9Y5Y3 372 aa13.09□□□□□ -0.31
HDAC5-206ENST00000587776 TMEM129A0AVI4 362 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 ZNF503-AS2A6NEH8 195 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 TRPC5OSA6NMA1 111 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 ZNF99A8MXY4 864 aaPredicted RBP13.08□□□□□ -0.32
HDAC5-206ENST00000587776 B4DSR2 109 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 M0R082 166 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 M0R233 179 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 M0R3G1 203 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 SYNGR3O43761 229 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 OR2T1O43869 369 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 SLC22A3O75751 556 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 KITP10721 976 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 NQO1P15559 274 aaKnown RBP13.08□□□□□ -0.32
HDAC5-206ENST00000587776 CBLP22681 906 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 MVDP53602 400 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 EGR4Q05215 589 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 RUNX1T1Q06455 604 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 BST1Q10588 318 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 C6orf10Q5SRN2 563 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 FAM69AQ5T7M9 428 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 SHQ1Q6PI26 577 aaKnown RBP13.08□□□□□ -0.32
HDAC5-206ENST00000587776 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.08□□□□□ -0.32
HDAC5-206ENST00000587776 ZNF417Q8TAU3 575 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 RNF217Q8TC41 542 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 SLC38A4Q969I6 547 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 ZNF837Q96EG3 531 aaPredicted RBP13.08□□□□□ -0.32
HDAC5-206ENST00000587776 OR2M2Q96R28 347 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 ZNF587Q96SQ5 575 aaPredicted RBP13.08□□□□□ -0.32
HDAC5-206ENST00000587776 METTL17Q9H7H0 456 aaPredicted RBP13.08□□□□□ -0.32
HDAC5-206ENST00000587776 B3GAT2Q9NPZ5 323 aa13.08□□□□□ -0.32
HDAC5-206ENST00000587776 C5orf58C9J3I9 102 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 HLA-HP01893 362 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 IDO1P14902 403 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 NR4A1P22736 598 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 GRPRP30550 384 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 GPR6P46095 362 aaPredicted RBP13.07□□□□□ -0.32
HDAC5-206ENST00000587776 ACTG1P63261 375 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 GALK2Q01415 458 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 SCGB2A2Q13296 93 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 GSG1Q2KHT4 349 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 TRMT5Q32P41 509 aaKnown RBP13.07□□□□□ -0.32
HDAC5-206ENST00000587776 GTDC1Q4AE62 458 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 BEND6Q5SZJ8 279 aaPredicted RBP13.07□□□□□ -0.32
HDAC5-206ENST00000587776 GKAP1Q5VSY0 366 aaPredicted RBP13.07□□□□□ -0.32
HDAC5-206ENST00000587776 HHATQ5VTY9 493 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 C5orf46Q6UWT4 87 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 UEVLDQ8IX04 471 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 MGARPQ8TDB4 240 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 MRPL24Q96A35 216 aaKnown RBP13.07□□□□□ -0.32
HDAC5-206ENST00000587776 ITCHQ96J02 903 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 MRPL37Q9BZE1 423 aaKnown RBP13.07□□□□□ -0.32
HDAC5-206ENST00000587776 LPAR2Q9HBW0 351 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 B3GAT1Q9P2W7 334 aa13.07□□□□□ -0.32
HDAC5-206ENST00000587776 REV1Q9UBZ9 1251 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms