RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 TAS2R5Q9NYW4 299 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 TBC1D24Q9ULP9 559 aa16.43■□□□□ 0.22
SMPD3-211ENST00000568373 BOLA2-SMG1P6H3BVE0 249 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 NTN3O00634 580 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-211ENST00000568373 CYC1P08574 325 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 C17orf67Q0P5P2 114 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 SGCBQ16585 318 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 MRPL14Q6P1L8 145 aaKnown RBP16.42■□□□□ 0.22
SMPD3-211ENST00000568373 MZT2AQ6P582 158 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 SLC23A3Q6PIS1 610 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 GDPD3Q7L5L3 318 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 ZNF511Q8NB15 262 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 C8orf44Q96CB5 159 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 TIGARQ9NQ88 270 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 ACOXLQ9NUZ1 547 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 C19orf25Q9UFG5 118 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-211ENST00000568373 ZNF346Q9UL40 294 aaKnown RBP16.42■□□□□ 0.22
SMPD3-211ENST00000568373 A0A1W2PRG6 482 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 HPGDSO60760 199 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 APOA1P02647 267 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 IL7P13232 177 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 SPNP16150 400 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 NAGAP17050 411 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 MYL9P24844 172 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 HTR3AP46098 478 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 GDI2P50395 445 aaKnown RBP16.42■□□□□ 0.22
SMPD3-211ENST00000568373 CCDC58Q4VC31 144 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 ACSM3Q53FZ2 586 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 C1orf140Q5VVS0 124 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 OR5M10Q6IEU7 315 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 RPL22L1Q6P5R6 122 aaKnown RBP16.42■□□□□ 0.22
SMPD3-211ENST00000568373 SLC16A9Q7RTY1 509 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 GDPD1Q8N9F7 314 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 OR2T4Q8NH00 348 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 THAP4Q8WY91 577 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 TMEM234Q8WY98 164 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 ACOT12Q8WYK0 555 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 SLC25A36Q96CQ1 311 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 CCDC86Q9H6F5 360 aaKnown RBP16.42■□□□□ 0.22
SMPD3-211ENST00000568373 AKIRIN1Q9H9L7 192 aaPredicted RBP16.42■□□□□ 0.22
SMPD3-211ENST00000568373 WDR70Q9NW82 654 aa16.42■□□□□ 0.22
SMPD3-211ENST00000568373 ANKUB1A6NFN9 424 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 H7C1C5 153 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 DCTN6O00399 190 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 GDF9O60383 454 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 TMCC2O75069 709 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 RENP00797 406 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 SERPINA3P01011 423 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 CD1AP06126 327 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 LCN6P62502 163 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 TRA2AQ13595 282 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMPD3-211ENST00000568373 HBMQ6B0K9 141 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 TPRA1Q86W33 373 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 TEX19Q8NA77 164 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 STK35Q8TDR2 534 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 GTPBP2Q9BX10 602 aaKnown RBP16.41■□□□□ 0.22
SMPD3-211ENST00000568373 SRA1Q9HD15 236 aaKnown RBP16.41■□□□□ 0.22
SMPD3-211ENST00000568373 ALPK2Q86TB3 2170 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 ZFAND5O76080 213 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 SUMO3P55854 103 aaPredicted RBP16.41■□□□□ 0.22
SMPD3-211ENST00000568373 CNIH2Q6PI25 160 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 C5orf46Q6UWT4 87 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 CCBE1Q6UXH8 406 aaPredicted RBP16.41■□□□□ 0.22
SMPD3-211ENST00000568373 OR6V1Q8N148 313 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 BMPERQ8N8U9 685 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 AGBL5Q8NDL9 886 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 OR13C5Q8NGS8 318 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 RNF138Q8WVD3 245 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 ST8SIA1Q92185 356 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 TTC9Q92623 222 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 SOSTQ9BQB4 213 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 GALNT9Q9HCQ5 603 aa16.41■□□□□ 0.22
SMPD3-211ENST00000568373 TRBV2A0A0J9YWF9 115 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 C2orf72A6NCS6 295 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 B4DXG7 233 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 C11orf98E9PRG8 122 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 SYPP08247 313 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 PRKCAP17252 672 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 GRPRP30550 384 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 ZNF684Q5T5D7 378 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 PAMR1Q6UXH9 720 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 TIGD4Q8IY51 512 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 OR11A1Q9GZK7 315 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 WDR54Q9H977 334 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 INIPQ9NRY2 104 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 MYOTQ9UBF9 498 aa16.4■□□□□ 0.22
SMPD3-211ENST00000568373 A0A1W2PQ09 198 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 DXOO77932 396 aaKnown RBP16.39■□□□□ 0.21
SMPD3-211ENST00000568373 AHSA1O95433 338 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 ZNF28P17035 718 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 EDNRAP25101 427 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 EVX1P49640 407 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 ZFP36L1Q07352 338 aaKnown RBP16.39■□□□□ 0.21
SMPD3-211ENST00000568373 PYDC2Q56P42 97 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 IDNKQ5T6J7 187 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 EEF1A1P5Q5VTE0 462 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 METAP1DQ6UB28 335 aaPredicted RBP16.39■□□□□ 0.21
SMPD3-211ENST00000568373 KCTD12Q96CX2 325 aaKnown RBP16.39■□□□□ 0.21
SMPD3-211ENST00000568373 SYT4Q9H2B2 425 aa16.39■□□□□ 0.21
SMPD3-211ENST00000568373 ADAM30Q9UKF2 790 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms