RNA–Protein interactions for RNA: ENST00000563184.1

LINC00557-201, long intergenic non-protein coding RNA 557, humanhuman

BASIC

Gene LINC00557, Length 1,279 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00557-201ENST00000563184 CYTH1Q15438 398 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 CYB5R2Q6BCY4 276 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 BLOC1S5Q8TDH9 187 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 IL22RA2Q969J5 263 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 NT5C3BQ969T7 300 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 FAM104AQ969W3 186 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 PANX2Q96RD6 677 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 FMO2Q99518 471 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 ROPN1BQ9BZX4 212 aaPredicted RBP3.59□□□□□ -1.83
LINC00557-201ENST00000563184 SIAEQ9HAT2 523 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 IL26Q9NPH9 171 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 HYPKQ9NX55 129 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 SLC25A15Q9Y619 301 aa3.59□□□□□ -1.83
LINC00557-201ENST00000563184 OR52A4PA6NMU1 304 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 FAM166BA8MTA8 275 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 OR7A10O76100 309 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 IGHDP01880 384 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 TDGF1P13385 188 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 ETS2P15036 469 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 CD1CP29017 333 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 TDGF1P3P51864 188 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 MECOMQ03112 1051 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 REG3AQ06141 175 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 GK3PQ14409 553 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 PSG5Q15238 335 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 ZNF77Q15935 545 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 CEP55Q53EZ4 464 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 PHYHD1Q5SRE7 291 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 H2BFWTQ7Z2G1 175 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 ZNF429Q86V71 674 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 ARIH2OSQ8N7S6 290 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 TPRX1Q8N7U7 411 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 FNDC5Q8NAU1 212 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 ACER1Q8TDN7 264 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 PYROXD1Q8WU10 500 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 SRSF12Q8WXF0 261 aaKnown RBP3.58□□□□□ -1.84
LINC00557-201ENST00000563184 TCEANC2Q96MN5 208 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 PELOQ9BRX2 385 aaKnown RBP3.58□□□□□ -1.84
LINC00557-201ENST00000563184 GBA3Q9H227 469 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 CALYQ9NYX4 217 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 TRAPPC4Q9Y296 219 aa3.58□□□□□ -1.84
LINC00557-201ENST00000563184 A6NDX4 124 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 C12orf71A8MTZ7 269 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 HAS3O00219 553 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 CA11O75493 328 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 MMP1P03956 469 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 PCCAP05165 728 aaPredicted RBP3.57□□□□□ -1.84
LINC00557-201ENST00000563184 ABOP16442 354 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 CCNCP24863 283 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 CALRP27797 417 aaKnown RBP3.57□□□□□ -1.84
LINC00557-201ENST00000563184 CRISP3P54108 245 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 IRX3P78415 501 aaPredicted RBP3.57□□□□□ -1.84
LINC00557-201ENST00000563184 PPIL2Q13356 520 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 GNMTQ14749 295 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 C6orf226Q5I0X4 101 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 Q6P435 159 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 ZNF621Q6ZSS3 439 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 Q8N9W7 124 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 SDR9C7Q8NEX9 313 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 SMARCD2Q92925 531 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 LRRC58Q96CX6 371 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 MS4A4EQ96PG1 132 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 CNN2Q99439 309 aaKnown RBP3.57□□□□□ -1.84
LINC00557-201ENST00000563184 SLC39A3Q9BRY0 314 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 GCOM2Q9BZD3 368 aaPredicted RBP3.57□□□□□ -1.84
LINC00557-201ENST00000563184 FANCIQ9NVI1 1328 aa3.57□□□□□ -1.84
LINC00557-201ENST00000563184 TRBV6-6A0A0A6YYG2 114 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 GOLGA8SH3BPF8 625 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 C1orf105O95561 183 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 TOP1P11387 765 aaKnown RBP3.56□□□□□ -1.84
LINC00557-201ENST00000563184 FDFT1P37268 417 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 MRPL28Q13084 256 aaKnown RBP3.56□□□□□ -1.84
LINC00557-201ENST00000563184 LRRC10Q5BKY1 277 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 CTSL3PQ5NE16 218 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 FRMPD2BQ6IN97 320 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 THOC6Q86W42 341 aaKnown RBP3.56□□□□□ -1.84
LINC00557-201ENST00000563184 PLA2G4DQ86XP0 818 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 MDS2Q8NDY4 140 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 VN1R2Q8NFZ6 395 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 OR1L6Q8NGR2 347 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 OR13C2Q8NGS9 318 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 TMEM158Q8WZ71 300 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 PLEKHA8Q96JA3 519 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 SLC25A39Q9BZJ4 359 aaPredicted RBP3.56□□□□□ -1.84
LINC00557-201ENST00000563184 RANBP3Q9H6Z4 567 aaPredicted RBP3.56□□□□□ -1.84
LINC00557-201ENST00000563184 SLC25A37Q9NYZ2 338 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 COX16Q9P0S2 106 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 XCL2Q9UBD3 114 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 NPTNQ9Y639 398 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 WSB1Q9Y6I7 421 aa3.56□□□□□ -1.84
LINC00557-201ENST00000563184 IGHV3-64DA0A0J9YX35 117 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 ARHGEF35A5YM69 484 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 NKX2-6A6NCS4 301 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 HOXC4P09017 264 aaPredicted RBP3.55□□□□□ -1.84
LINC00557-201ENST00000563184 VHLP40337 213 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 NPBWR2P48146 333 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 CDH4P55283 916 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 RPL23AP62750 156 aaKnown RBP3.55□□□□□ -1.84
LINC00557-201ENST00000563184 BST1Q10588 318 aa3.55□□□□□ -1.84
LINC00557-201ENST00000563184 ZMYND11Q15326 602 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms