RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 DNAAF1Q8NEP3 725 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 OR4Q3Q8NH05 313 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 OR10G6Q8NH81 332 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 ZCCHC10Q8TBK6 192 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 FCAMRQ8WWV6 532 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 CALML5Q9NZT1 146 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 CD207Q9UJ71 328 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 PILRAQ9UKJ1 303 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 CARHSP1Q9Y2V2 147 aaKnown RBP12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 A0A087WUU8 490 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 DAPL1A0PJW8 107 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 RFPL4AA6NLU0 287 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 NUDT19A8MXV4 375 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 C10orf142B7Z368 130 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 RFPL4AL1F8VTS6 287 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 WRBO00258 174 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 SPP1P10451 314 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 FOLR2P14207 255 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 DEFB134Q4QY38 66 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 ZNF311Q5JNZ3 666 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 C10orf91Q5T1B1 145 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 FAM27D1Q5T7N8 215 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 FCRLBQ6BAA4 426 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 FAM111BQ6SJ93 734 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 C7orf57Q8NEG2 295 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 OR7G2Q8NG99 324 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 OR51G2Q8NGK0 314 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 PIGKQ92643 395 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 ZG16BQ96DA0 208 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 SLC35A4Q96G79 324 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 GINS4Q9BRT9 223 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 HS3ST3A1Q9Y663 406 aa12.8□□□□□ -0.36
RABGGTA-220ENST00000560998 DNAJB6O75190 326 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 ZIC2O95409 532 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 IGF2P01344 180 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 ANXA7P20073 488 aaKnown RBP12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 ART1P52961 327 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 LSM11P83369 360 aaKnown RBP eCLIP12.79□□□□□ -0.363e-9■□□□□ 10.4
RABGGTA-220ENST00000560998 ILF3Q12906 894 aaKnown RBP eCLIP12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 SERTAD2Q14140 314 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 GUCA2BQ16661 112 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 LINC00303Q3SY05 128 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 ACSM3Q53FZ2 586 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 HEPHL1Q6MZM0 1159 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 MFSD12Q6NUT3 480 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 PRSS45Q7RTY3 260 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 FAM122BQ7Z309 247 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 VRK2Q86Y07 508 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 SAMD14Q8IZD0 417 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 SMRP1Q8NCR6 262 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 OR4K14Q8NGD5 310 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 OR14A16Q8NHC5 309 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 ZFPM2Q8WW38 1151 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 MS4A4EQ96PG1 132 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 TIMP4Q99727 224 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 MRI1Q9BV20 369 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 MMP17Q9ULZ9 603 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 CLEC4AQ9UMR7 237 aa12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 GPR55Q9Y2T6 319 aaPredicted RBP12.79□□□□□ -0.36
RABGGTA-220ENST00000560998 GPR31O00270 319 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 IMPA2O14732 288 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 B3GALT2O43825 422 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SEMA4FO95754 770 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 ZNF806P0C7X5 589 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 ZNF35P13682 527 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 GNSP15586 552 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 FAUP35544 74 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 OMPP47874 163 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 RAB5BP61020 215 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SNTB1Q13884 538 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 ZNF345Q14585 488 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 CLEC12AQ5QGZ9 265 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 HES5Q5TA89 166 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SERPINA12Q8IW75 414 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 RELL2Q8NC24 303 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 TMEM185AQ8NFB2 350 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 BBS1Q8NFJ9 593 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 OR2T33Q8NG76 320 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 OR2AK2Q8NG84 335 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 OR13H1Q8NG92 308 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 ZNF671Q8TAW3 534 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 ADAMTS15Q8TE58 950 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 PGLYRP3Q96LB9 341 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 TMEM74BQ9NUR3 256 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SLC13A4Q9UKG4 626 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 DAPP1Q9UN19 280 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 URADA6NGE7 173 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SOCS6O14544 535 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 TNFP01375 233 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 LSSP48449 732 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 PDX1P52945 283 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 H2BFSP57053 126 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 TAS2R41P59536 307 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 DMKNQ6E0U4 476 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 NIPAL3Q6P499 406 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 TMEM88Q6PEY1 159 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 TSSK4Q6SA08 328 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 ABHD13Q7L211 337 aa12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 MEPCEQ7L2J0 689 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-220ENST00000560998 SLC36A1Q7Z2H8 476 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms