RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 ALKBH4Q9NXW9 302 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 TAS2R5Q9NYW4 299 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 DKKL1Q9UK85 242 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 HDGFL3Q9Y3E1 203 aa12.44□□□□□ -0.42
TPM1-215ENST00000558868 KNTC1P50748 2209 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 SPEGQ15772 3267 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 DAPL1A0PJW8 107 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 A6NIZ1 184 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 NPIPB13A6NJU9 1138 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 LIPT2A6NK58 231 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 NPIPB4C9JG80 1138 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 J3QRE1 110 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 MASP2O00187 686 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 SLC30A4O14863 429 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 AIREO43918 545 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 FZD7O75084 574 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 BCL10O95999 233 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 F13BP05160 661 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 ADRA2AP08913 450 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 SBK2P0C263 348 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 ITGA3P26006 1051 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 CENPAP49450 140 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 DIO1P49895 249 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 RAP1BP61224 184 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 RPL27P61353 136 aaKnown RBP12.43□□□□□ -0.42
TPM1-215ENST00000558868 RAP1AP62834 184 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 NFATC3Q12968 1075 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 LSAMPQ13449 338 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 GGTLC2Q14390 218 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 OR7A5Q15622 319 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 CTF1Q16619 201 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 TSTQ16762 297 aaKnown RBP12.43□□□□□ -0.42
TPM1-215ENST00000558868 FAM205BPQ63HN1 556 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 GDPGP1Q6ZNW5 385 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 ARIH2OSQ8N7S6 290 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 ADPRHL1Q8NDY3 354 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 OR2T4Q8NH00 348 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 ZNF417Q8TAU3 575 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 THAP4Q8WY91 577 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 KISS1RQ969F8 398 aaPredicted RBP12.43□□□□□ -0.42
TPM1-215ENST00000558868 RASD2Q96D21 266 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 NXPE2Q96DL1 559 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 TSPAN32Q96QS1 320 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 ZNF587Q96SQ5 575 aaPredicted RBP12.43□□□□□ -0.42
TPM1-215ENST00000558868 NMNAT3Q96T66 252 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 CNN2Q99439 309 aaKnown RBP12.43□□□□□ -0.42
TPM1-215ENST00000558868 DDOQ99489 341 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 UTP23Q9BRU9 249 aaKnown RBP12.43□□□□□ -0.42
TPM1-215ENST00000558868 HCAR1Q9BXC0 346 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 TXNIPQ9H3M7 391 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 PROK2Q9HC23 129 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 CHST11Q9NPF2 352 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 ERVK13-1Q9NX77 482 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 ZNF346Q9UL40 294 aaKnown RBP12.43□□□□□ -0.42
TPM1-215ENST00000558868 B3GALT5Q9Y2C3 310 aa12.43□□□□□ -0.42
TPM1-215ENST00000558868 CAB39Q9Y376 341 aaPredicted RBP12.43□□□□□ -0.42
TPM1-215ENST00000558868 GJE1A6NN92 205 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 C12orf71A8MTZ7 269 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 C11orf98E9PRG8 122 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 SEC14L5O43304 696 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 GLCEO94923 617 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 APOL3O95236 402 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 WISP1O95388 367 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 LIMS3P0CW19 117 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 LIMS4P0CW20 117 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 SPI1P17947 270 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 CNR1P21554 472 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 AHCYP23526 432 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 SRD5A2P31213 254 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 DAP3P51398 398 aaKnown RBP12.42□□□□□ -0.42
TPM1-215ENST00000558868 TLE3Q04726 772 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 PUDPQ08623 228 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 ACSM1Q08AH1 577 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 INPP5JQ15735 1006 aaPredicted RBP12.42□□□□□ -0.42
TPM1-215ENST00000558868 ZNF468Q5VIY5 522 aaPredicted RBP12.42□□□□□ -0.42
TPM1-215ENST00000558868 SHFQ7M4L6 423 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 ATP6V1C2Q8NEY4 427 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 SMPDL3BQ92485 455 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 JSRP1Q96MG2 331 aaPredicted RBP12.42□□□□□ -0.42
TPM1-215ENST00000558868 C5orf34Q96MH7 638 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 OPALINQ96PE5 141 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 PIGQQ9BRB3 760 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 LRFN1Q9P244 771 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 SEC14L4Q9UDX3 406 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 BOKQ9UMX3 212 aaPredicted RBP12.42□□□□□ -0.42
TPM1-215ENST00000558868 TRAPPC4Q9Y296 219 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 MRPS18CQ9Y3D5 142 aaKnown RBP12.42□□□□□ -0.42
TPM1-215ENST00000558868 HRH3Q9Y5N1 445 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 NOX1Q9Y5S8 564 aa12.42□□□□□ -0.42
TPM1-215ENST00000558868 MPDZO75970 2070 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 A0A1W2PPW3 197 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 OR6C68A6NDL8 312 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 H3BML4 177 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 AKAP8O43823 692 aaKnown RBP12.41□□□□□ -0.42
TPM1-215ENST00000558868 SERPINI2O75830 405 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 OR2T7P0C7T2 308 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 IMPDH2P12268 514 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 PSMA1P25786 263 aaKnown RBP12.41□□□□□ -0.42
TPM1-215ENST00000558868 PCSK6P29122 969 aa12.41□□□□□ -0.42
TPM1-215ENST00000558868 UGT2B10P36537 528 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms