RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 ZNF835Q9Y2P0 537 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 OR2AG2A6NM03 316 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 OR52A4PA6NMU1 304 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SLC35E2BP0CK96 405 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 HOXB8P17481 243 aaPredicted RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 PRDX3P30048 256 aaKnown RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 CASRP41180 1078 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SLC25A11Q02978 314 aaKnown RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 PJVKQ0ZLH3 352 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 TTLL9Q3SXZ7 439 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 TPGS2Q68CL5 300 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 FAM129CQ86XR2 697 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 KMT5CQ86Y97 462 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 HSD17B11Q8NBQ5 300 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SLC39A7Q92504 469 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 ZBTB8AQ96BR9 441 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 THSD1Q9NS62 852 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 SIX4Q9UIU6 781 aa8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 ZNF346Q9UL40 294 aaKnown RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 CEP170BQ9Y4F5 1589 aaPredicted RBP8.35□□□□□ -1.07
GTF2A1-203ENST00000553612 A0A1W2PS29 197 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 H7BYZ3 331 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 POU2F2P09086 479 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 OAZ1P54368 228 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 KLF3P57682 345 aaPredicted RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 CDK5Q00535 292 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PRPF38BQ5VTL8 546 aaKnown RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 OR51L1Q8NGJ5 315 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 OR5K2Q8NHB8 316 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 ZNF583Q96ND8 569 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 MCOLN1Q9GZU1 580 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 SGK2Q9HBY8 427 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 CA10Q9NS85 328 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 WRAP73Q9P2S5 460 aaPredicted RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 ARL2-SNX15V9GYD0 113 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PPP5D1E7EU14 171 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 NFKBIEO00221 500 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 HPP00738 406 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 ANXA4P09525 319 aaPredicted RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 WNT4P56705 351 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 CDK3Q00526 305 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PTP4A2Q12974 167 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 GPNMBQ14956 572 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 MLF2Q15773 248 aaPredicted RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 R3HDM4Q96D70 268 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 MRGPRX2Q96LB1 330 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 SEMA5BQ9P283 1151 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PCDHB1Q9Y5F3 818 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PPRC1Q5VV67 1664 aaKnown RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 NPIPB9F8W1W9 429 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 GPR182O15218 404 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PDE6DO43924 150 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 GLB1P16278 677 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 TDGF1P3P51864 188 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PTGES3Q15185 160 aaKnown RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PYCR3Q53H96 274 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 TMEM220Q6QAJ8 160 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 ARRDC2Q8TBH0 407 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 SLC25A44Q96H78 314 aaPredicted RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 ARHGDIGQ99819 225 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 SNHG12Q9BXW3 62 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 LINC00597Q9H2U6 94 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 SEC61A2Q9H9S3 476 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 AMDHD2Q9Y303 409 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 ABCA6Q8N139 1617 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 BCL2L11O43521 198 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 SELENOFO60613 162 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 EEDO75530 441 aaKnown RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 RAD51DO75771 328 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 F13BP05160 661 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PRSS56P0CW18 603 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 CD68P34810 354 aaPredicted RBP8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 HIST1H3AP68431 136 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 TAZQ16635 292 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 ZNF620Q6ZNG0 422 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 PRR18Q8N4B5 295 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 STYXQ8WUJ0 223 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 FAM210BQ96KR6 192 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 TAF9BQ9HBM6 251 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 ATRNL1Q5VV63 1379 aa8.34□□□□□ -1.07
GTF2A1-203ENST00000553612 EFSO43281 561 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 B4GALT5O43286 388 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 NUDT14O95848 222 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 NTF3P20783 257 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 CMPK1P30085 196 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 HTRA3P83110 453 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 GAB1Q13480 694 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 AMZ1Q400G9 498 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 SLC35D3Q5M8T2 416 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 LRRC70Q7Z2Q7 622 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 UBE3DQ7Z6J8 389 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 DNERQ8NFT8 737 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 OR8J3Q8NGG0 315 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 GPER1Q99527 375 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 LPAR2Q9HBW0 351 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 ERVW-1Q9UQF0 538 aa8.34□□□□□ -1.08
GTF2A1-203ENST00000553612 ADGRB2O60241 1585 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 OR5H14A6NHG9 310 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 TP53I11O14683 189 aa8.33□□□□□ -1.08
GTF2A1-203ENST00000553612 HSD17B6O14756 317 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 126.7 ms