RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 FAM156AQ8NDB6 213 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 RBM15BQ8NDT2 890 aaKnown RBP10.4□□□□□ -0.74
RAB5C-204ENST00000547517 OR5J2Q8NH18 312 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 PFN4Q8NHR9 129 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 GEMIN6Q8WXD5 167 aaKnown RBP10.4□□□□□ -0.74
RAB5C-204ENST00000547517 MUCL1Q96DR8 90 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 SLC19A3Q9BZV2 496 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 ESRP2Q9H6T0 727 aaKnown RBP10.4□□□□□ -0.74
RAB5C-204ENST00000547517 FKRPQ9H9S5 495 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 RIMS3Q9UJD0 308 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 AKAP6Q13023 2319 aa10.4□□□□□ -0.74
RAB5C-204ENST00000547517 CCDC168Q8NDH2 2452 aa10.4□□□□□ -0.75
RAB5C-204ENST00000547517 SPG11Q96JI7 2443 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 MS4A18H0YCH9 400 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 J3KTA2 159 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 PLPP3O14495 311 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 PIP5K1CO60331 668 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 SLC43A1O75387 559 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 UPK3AO75631 287 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 OR6A2O95222 327 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 PLAUP00749 431 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 ADORA3P0DMS8 318 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 RBM34P42696 430 aaKnown RBP10.39□□□□□ -0.75
RAB5C-204ENST00000547517 TGFBR3Q03167 851 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 BSPH1Q075Z2 132 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 GABRA6Q16445 453 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 MS4A18Q3C1V0 323 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 NCMAPQ5T1S8 102 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 CARD17Q5XLA6 110 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 OR7E24Q6IFN5 339 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 ADAM5Q6NVV9 412 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 KLHL24Q6TFL4 600 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 C16orf89Q6UX73 402 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 LINGO2Q7L985 606 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 SLC46A3Q7Z3Q1 461 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 NANOGNBQ7Z5D8 188 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 P2RY8Q86VZ1 359 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 C17orf78Q8N4C9 275 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 FITM2Q8N6M3 262 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 LRRC17Q8N6Y2 441 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 C1orf162Q8NEQ5 155 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-204ENST00000547517 TMEM239Q8WW34 195 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 OR2M2Q96R28 347 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 AMBRA1Q9C0C7 1298 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 MEPEQ9NQ76 525 aaPredicted RBP10.39□□□□□ -0.75
RAB5C-204ENST00000547517 NANSQ9NR45 359 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 MED29Q9NX70 200 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 FAM53CQ9NYF3 392 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 NPAP1Q9NZP6 1156 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 RHCGQ9UBD6 479 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 A4GNTQ9UNA3 340 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 RNF115Q9Y4L5 304 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 NOX1Q9Y5S8 564 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 SNX13Q9Y5W8 968 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 V9GYQ6 96 aa10.39□□□□□ -0.75
RAB5C-204ENST00000547517 LOC102725191A0A1B0GVB3 256 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 OR6C65A6NJZ3 312 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 GMNNO75496 209 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 ZNF432O94892 652 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 MT-ND1P03886 318 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 CD3EP07766 207 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 THRBP10828 461 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 CD53P19397 219 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 IFNA8P32881 189 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 ZNF83P51522 516 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 ROR2Q01974 943 aaKnown RBP10.38□□□□□ -0.75
RAB5C-204ENST00000547517 ST3GAL3Q11203 375 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 ACKR1Q16570 336 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 HIKESHIQ53FT3 197 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 GLYATQ6IB77 296 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 HMBOX1Q6NT76 420 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 SSX8Q7RTT4 187 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 DEFB107AQ8IZN7 70 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 OFCC1Q8IZS5 231 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 TMEM123Q8N131 208 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 GPR137CQ8N3F9 429 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 PIK3C3Q8NEB9 887 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 KBTBD8Q8NFY9 601 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 SGTBQ96EQ0 304 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 MUS81Q96NY9 551 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 CCL19Q99731 98 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 TMEM204Q9BSN7 226 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 EMC6Q9BV81 110 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 LINC00470Q9BZP3 86 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 SLC17A5Q9NRA2 495 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 C20orf141Q9NUB4 165 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 NDE1Q9NXR1 346 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 ZNF229Q9UJW7 825 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 RPS6KA6Q9UK32 745 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 AMDHD2Q9Y303 409 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 MED31Q9Y3C7 131 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 SLC25A15Q9Y619 301 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 PRR14LQ5THK1 2151 aa10.38□□□□□ -0.75
RAB5C-204ENST00000547517 DPRXA6NFQ7 191 aa10.37□□□□□ -0.75
RAB5C-204ENST00000547517 M0R1B8 84 aa10.37□□□□□ -0.75
RAB5C-204ENST00000547517 M0R3G1 203 aa10.37□□□□□ -0.75
RAB5C-204ENST00000547517 HS3ST1O14792 307 aa10.37□□□□□ -0.75
RAB5C-204ENST00000547517 RNF13O43567 381 aa10.37□□□□□ -0.75
RAB5C-204ENST00000547517 OR7A10O76100 309 aa10.37□□□□□ -0.75
RAB5C-204ENST00000547517 HIST1H2ABP04908 130 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms