RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 FCGR2AP12318 317 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 CLDN10P78369 228 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 HTR4Q13639 388 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 OR13F1Q8NGS4 319 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 FAM213BQ8TBF2 198 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 UBL7Q96S82 380 aaPredicted RBP9.25□□□□□ -0.93
COL4A6-208ENST00000538570 STEAP1Q9UHE8 339 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 TRAPPC2LQ9UL33 140 aa9.25□□□□□ -0.93
COL4A6-208ENST00000538570 PTGESO14684 152 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 BET1O15155 118 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 OPN1LWP04000 364 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 TMEM11P17152 192 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 HIST1H1TP22492 207 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 HOXA11P31270 313 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 BMPR1AP36894 532 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 DCAF7P61962 342 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 HBG1P69891 147 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 HBG2P69892 147 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 BAXQ07812 192 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 OR2G6Q5TZ20 316 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 H3F3CQ6NXT2 135 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 LRRC18Q8N456 261 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 CNEP1R1Q8N9A8 125 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 C3orf30Q96M34 536 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 HAPLN2Q9GZV7 340 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 C11orf54Q9H0W9 315 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 TREX1Q9NSU2 369 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 C7orf72A4D263 438 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 WASH4PA8MWX3 477 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 KIAA1324LA8MWY0 1029 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 LY86O95711 162 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 HLA-DOBP13765 273 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 PTGER1P34995 402 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 TAGLN2P37802 199 aaKnown RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 P2RX3P56373 397 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 RANP62826 216 aaKnown RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 SLC14A2Q15849 920 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 SYPL1Q16563 259 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 RNLSQ5VYX0 342 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 ABLIM2Q6H8Q1 611 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 MMP21Q8N119 569 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 DTD1Q8TEA8 209 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 KHSRPQ92945 711 aaKnown RBP eCLIP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF566Q969W8 418 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 TCTN2Q96GX1 697 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 RBM14Q96PK6 669 aaKnown RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 CRLF2Q9HC73 371 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 DYNLRB1Q9NP97 96 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 XRN1Q8IZH2 1706 aaKnown RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 A0A0U1RQS6 177 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 MCRIP1C9JLW8 97 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 PRPH2P23942 346 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 HTR5AP47898 357 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 NPBWR1P48145 328 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 EBPQ15125 230 aaKnown RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 TOR2AQ5JU69 321 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 SHEQ5VZ18 495 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 NLRC3Q7RTR2 1065 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 OR13C2Q8NGS9 318 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 LILRB1Q8NHL6 650 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 SLC41A2Q96JW4 573 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 OR52A5Q9H2C5 316 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 NRIP3Q9NQ35 241 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 MOKQ9UQ07 419 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 CAMK2AQ9UQM7 478 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 PRSS21Q9Y6M0 314 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 A8MVM7 634 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 ZFAND5O76080 213 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 SNRPBP14678 240 aaKnown RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 PCSK6P29122 969 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 GDNFP39905 211 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 ACSM1Q08AH1 577 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 PIANPQ8IYJ0 282 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 RASD2Q96D21 266 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 DHRS4Q9BTZ2 278 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 ACSS1Q9NUB1 689 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 DRGXA6NNA5 263 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 ZNF593O00488 134 aaPredicted RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 TCF21O43680 179 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 SRPXP78539 464 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 PDE7AQ13946 482 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 PLK5Q496M5 336 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 ETV3LQ6ZN32 361 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 SLC16A13Q7RTY0 426 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 RBMXL3Q8N7X1 1067 aaKnown RBP9.24□□□□□ -0.93
COL4A6-208ENST00000538570 PIGQQ9BRB3 760 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 NUDT22Q9BRQ3 303 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 C1orf198Q9H425 327 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 NOX4Q9NPH5 578 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 SLC39A9Q9NUM3 307 aa9.24□□□□□ -0.93
COL4A6-208ENST00000538570 TRBV4-1A0A0J9YWV2 114 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 GALR3O60755 368 aaPredicted RBP9.23□□□□□ -0.93
COL4A6-208ENST00000538570 F13BP05160 661 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 OMGP23515 440 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 CCR7P32248 378 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 MTCP1P56278 107 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 KCNJ10P78508 379 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 AKR1C1Q04828 323 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 SOHLH1Q5JUK2 328 aa9.23□□□□□ -0.93
COL4A6-208ENST00000538570 MRPL2Q5T653 305 aaKnown RBP9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms