RNA–Protein interactions for RNA: ENST00000533961.1

RDX-215, Transcript of radixin, human

TSL 2

Gene RDX, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RDX-215	ENST00000533961	EMG1	Q92979	244 aa	Known RBP	2.02	□□□□□ -2.09
RDX-215	ENST00000533961	C12orf42	Q96LP6	360 aa		2.02	□□□□□ -2.09
RDX-215	ENST00000533961	RBM14	Q96PK6	669 aa	Known RBP	2.02	□□□□□ -2.09
RDX-215	ENST00000533961	NRIP2	Q9BQI9	281 aa		2.02	□□□□□ -2.09
RDX-215	ENST00000533961	PELO	Q9BRX2	385 aa	Known RBP	2.02	□□□□□ -2.09
RDX-215	ENST00000533961	DEFB127	Q9H1M4	99 aa		2.02	□□□□□ -2.09
RDX-215	ENST00000533961	UGT1A7	Q9HAW7	530 aa		2.02	□□□□□ -2.09
RDX-215	ENST00000533961	UGT1A10	Q9HAW8	530 aa		2.02	□□□□□ -2.09
RDX-215	ENST00000533961	UGT1A8	Q9HAW9	530 aa		2.02	□□□□□ -2.09
RDX-215	ENST00000533961	PDS5B	Q9NTI5	1447 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	2.01	□□□□□ -2.09
RDX-215	ENST00000533961	NBR2	O15453	112 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	PRKAB2	O43741	272 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	SS18L1	O75177	396 aa	Predicted RBP	2.01	□□□□□ -2.09
RDX-215	ENST00000533961	IL1B	P01584	269 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	IGLV2-23	P01705	113 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	POU2F1	P14859	743 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	CRISP2	P16562	243 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	ZNF30	P17039	623 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	MAG	P20916	626 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	RFC4	P35249	363 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	ZNF136	P52737	540 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	FGL1	Q08830	312 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	CYTH1	Q15438	398 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	KRTAP21-2	Q3LI59	83 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	SFT2D3	Q587I9	215 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	CFAP157	Q5JU67	520 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	TSPO2	Q5TGU0	170 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	ENPP6	Q6UWR7	440 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	CCDC50	Q8IVM0	306 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	FAM133A	Q8N9E0	248 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	DUSP18	Q8NEJ0	188 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	CCDC54	Q8NEL0	328 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	OR1L4	Q8NGR5	311 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	EFHD2	Q96C19	240 aa	Predicted RBP	2.01	□□□□□ -2.09
RDX-215	ENST00000533961	C10orf35	Q96D05	121 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	CXorf40B	Q96DE9	158 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	TCEANC2	Q96MN5	208 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	TMEM43	Q9BTV4	400 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	PPA2	Q9H2U2	334 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	AZI2	Q9H6S1	392 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	2.01	□□□□□ -2.09
RDX-215	ENST00000533961	LY9	Q9HBG7	655 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	DMAP1	Q9NPF5	467 aa	Predicted RBP	2.01	□□□□□ -2.09
RDX-215	ENST00000533961	ADAP2	Q9NPF8	381 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	CALY	Q9NYX4	217 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	ADAM28	Q9UKQ2	775 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	ATP6V0A2	Q9Y487	856 aa		2.01	□□□□□ -2.09
RDX-215	ENST00000533961	PHF3	Q92576	2039 aa	Known RBP	2	□□□□□ -2.09
RDX-215	ENST00000533961	KIF16B	Q96L93	1317 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	ARHGAP21	Q5T5U3	1957 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	MTCL1	Q9Y4B5	1905 aa	Known RBP	2	□□□□□ -2.09
RDX-215	ENST00000533961	IGKV2D-24	A0A075B6R9	120 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	ANGPT2	O15123	496 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	B4GALT2	O60909	372 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	PLEK	P08567	350 aa	Predicted RBP	2	□□□□□ -2.09
RDX-215	ENST00000533961	UBTFL1	P0CB47	393 aa	Predicted RBP	2	□□□□□ -2.09
RDX-215	ENST00000533961	HSMCR30	P0CW71	290 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	SLC2A5	P22732	501 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	HNMT	P50135	292 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	DUSP3	P51452	185 aa	Predicted RBP	2	□□□□□ -2.09
RDX-215	ENST00000533961	SPIB	Q01892	262 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	GANAB	Q14697	944 aa	Known RBP	2	□□□□□ -2.09
RDX-215	ENST00000533961	ATAD3B	Q5T9A4	648 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	OR2A2	Q6IF42	318 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	PUSL1	Q8N0Z8	303 aa	Known RBP	2	□□□□□ -2.09
RDX-215	ENST00000533961	ZADH2	Q8N4Q0	377 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	OR10G2	Q8NGC3	310 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	OR52M1	Q8NGK5	317 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	OR1L6	Q8NGR2	347 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	ZNF596	Q8TC21	504 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	MAGEE2	Q8TD90	523 aa	Predicted RBP	2	□□□□□ -2.09
RDX-215	ENST00000533961	GIMAP1	Q8WWP7	306 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	SMARCD2	Q92925	531 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	ZNF641	Q96N77	438 aa	Predicted RBP	2	□□□□□ -2.09
RDX-215	ENST00000533961	PSKH2	Q96QS6	385 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	TUBGCP2	Q9BSJ2	902 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	VCX2	Q9H322	139 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	GIN1	Q9NXP7	522 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	BFAR	Q9NZS9	450 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	SPATA7	Q9P0W8	599 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	CDH9	Q9ULB4	789 aa		2	□□□□□ -2.09
RDX-215	ENST00000533961	FRMPD3	Q5JV73	1810 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	OR5B21	A6NL26	309 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	C12orf71	A8MTZ7	269 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	TIMM8A	O60220	97 aa	Predicted RBP	1.99	□□□□□ -2.09
RDX-215	ENST00000533961	ZNF324	O75467	553 aa	Predicted RBP	1.99	□□□□□ -2.09
RDX-215	ENST00000533961	CSF3	P09919	207 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	TLX1NB	P0CAT3	122 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	GKN3P	P0CG01	181 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	HNRNPH3	P31942	346 aa	Known RBP	1.99	□□□□□ -2.09
RDX-215	ENST00000533961	CDKN1B	P46527	198 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	CCT3	P49368	545 aa	Known RBP	1.99	□□□□□ -2.09
RDX-215	ENST00000533961	AIF1	P55008	147 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	SEC61G	P60059	68 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	IL24	Q13007	206 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	DPYSL2	Q16555	572 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	SGCA	Q16586	387 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	TMEM183B	Q1AE95	376 aa		1.99	□□□□□ -2.09
RDX-215	ENST00000533961	KLHL38	Q2WGJ6	581 aa		1.99	□□□□□ -2.09

Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms