RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 TCRBV5S2A0A599 114 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 LRRN3E7EW58 273 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 ACOT8O14734 319 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 IFI30P13284 250 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 NTF4P34130 210 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 CLDN17P56750 224 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 PRKCDQ05655 676 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 CHRNB3Q05901 458 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 FGD3Q5JSP0 725 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 NIPAL3Q6P499 406 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 PGM2L1Q6PCE3 622 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 MBOAT2Q6ZWT7 520 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 SSX8Q7RTT4 187 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 SLC46A3Q7Z3Q1 461 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 PIWIL3Q7Z3Z3 882 aaKnown RBP13.26□□□□□ -0.29
RNF4-210ENST00000508235 TSEN54Q7Z6J9 526 aaKnown RBP13.26□□□□□ -0.29
RNF4-210ENST00000508235 NRMQ8IXM6 262 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 ANKK1Q8NFD2 765 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 LINC01560Q8TB33 94 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 SEPHS2Q99611 448 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 TMEM5Q9Y2B1 443 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 TESMINQ9Y4I5 508 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 COL12A1Q99715 3063 aa13.26□□□□□ -0.29
RNF4-210ENST00000508235 A0A087WUU8 490 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 AQP12BA6NM10 295 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 C11orf98E9PRG8 122 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 BLOC1S5-TXNDC5H3BN57 136 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 GSC2O15499 205 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 RNF13O43567 381 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 SLC43A1O75387 559 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 GADD45GO95257 159 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 IGHV3-9P01782 118 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 SAGP10523 405 aaPredicted RBP13.25□□□□□ -0.29
RNF4-210ENST00000508235 COX5AP20674 150 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 IGHV1-2P23083 117 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 CCKARP32238 428 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 SPIBQ01892 262 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 POU3F1Q03052 451 aaPredicted RBP13.25□□□□□ -0.29
RNF4-210ENST00000508235 TGFBR3Q03167 851 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 FAPQ12884 760 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 DAZAP2Q15038 168 aaPredicted RBP13.25□□□□□ -0.29
RNF4-210ENST00000508235 ANKDD1AQ495B1 522 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 IQCCQ4KMZ1 466 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 OR7E24Q6IFN5 339 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 BHLHA15Q7RTS1 189 aaPredicted RBP13.25□□□□□ -0.29
RNF4-210ENST00000508235 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.25□□□□□ -0.29
RNF4-210ENST00000508235 AQP12AQ8IXF9 295 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 LRRC17Q8N6Y2 441 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 DHRS1Q96LJ7 313 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 ADAD1Q96M93 576 aaKnown RBP13.25□□□□□ -0.29
RNF4-210ENST00000508235 WFIKKN1Q96NZ8 548 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 LINC00470Q9BZP3 86 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 ACTR6Q9GZN1 396 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 MCCC2Q9HCC0 563 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 TAS2R16Q9NYV7 291 aa13.25□□□□□ -0.29
RNF4-210ENST00000508235 PKDREJQ9NTG1 2253 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 CIB4A0PJX0 185 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 ZNF726A6NNF4 738 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 EBAG9O00559 213 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 TRAF3IP2O43734 574 aaPredicted RBP13.24□□□□□ -0.29
RNF4-210ENST00000508235 PIP5K1CO60331 668 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 KRT36O76013 467 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 ZNF432O94892 652 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 DIRAS1O95057 198 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 HPRP00739 348 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 EDNRAP25101 427 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 MAGEA2P43356 314 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 SLC9A3P48764 834 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 SELENOPP49908 381 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 TLE4Q04727 773 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 FLOT2Q14254 428 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 TAF11Q15544 211 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 C1QTNF12Q5T7M4 302 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 TSPO2Q5TGU0 170 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 PODNL1Q6PEZ8 512 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 CCDC121Q6ZUS5 278 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 HDDC2Q7Z4H3 204 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 P2RY8Q86VZ1 359 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 ZNF295-AS1Q8N0V1 137 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 C1orf162Q8NEQ5 155 aaPredicted RBP13.24□□□□□ -0.29
RNF4-210ENST00000508235 SLC7A13Q8TCU3 470 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 HSD17B8Q92506 261 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 CADM1Q9BY67 442 aaKnown RBP13.24□□□□□ -0.29
RNF4-210ENST00000508235 NDEL1Q9GZM8 345 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 LRMDAQ9H2I8 198 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 SLC7A10Q9NS82 523 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 TAS2R5Q9NYW4 299 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 TMCC3Q9ULS5 477 aa13.24□□□□□ -0.29
RNF4-210ENST00000508235 A0A1W2PRG6 482 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 A6NNC1 897 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 EFCAB9A8MZ26 197 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 ZNF587BE7ETH6 402 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 LYZL6O75951 148 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 RAP2AP10114 183 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 HLA-DOBP13765 273 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 MPGP29372 298 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 RRM2P31350 389 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 DNAJA1P31689 397 aaKnown RBP13.23□□□□□ -0.29
RNF4-210ENST00000508235 IFNGR2P38484 337 aa13.23□□□□□ -0.29
RNF4-210ENST00000508235 PRPS1P60891 318 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms