RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 OR9A4Q8NGU2 314 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 OR10AC1Q8NH08 325 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 FAM46BQ96A09 425 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 SPACA7Q96KW9 195 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 AIFM2Q9BRQ8 373 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 OR2S2Q9NQN1 319 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 INPP5EQ9NRR6 644 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 HRASLS2Q9NWW9 162 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 KCNE5Q9UJ90 142 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 SLC6A5Q9Y345 797 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 STON1Q9Y6Q2 735 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 MED12Q93074 2177 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 MCRIP1C9JLW8 97 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 SPARCP09486 303 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 IFNGR1P15260 489 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 IL32P24001 234 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 LUMP51884 338 aaPredicted RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 MC2RQ01718 297 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 MLC1Q15049 377 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 SMAD2Q15796 467 aaKnown RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 DEFB115Q30KQ5 88 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 ABHD13Q7L211 337 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 GLB1L2Q8IW92 636 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 PRR22Q8IZ63 422 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 KISS1RQ969F8 398 aaPredicted RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 POLMQ9NP87 494 aaPredicted RBP11.66□□□□□ -0.54
VPS52-218ENST00000482399 PCDHB16Q9NRJ7 776 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 ASF1BQ9NVP2 202 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 OR5V1Q9UGF6 321 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 FBXO4Q9UKT5 387 aa11.66□□□□□ -0.54
VPS52-218ENST00000482399 OR6C68A6NDL8 312 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 TBX19O60806 448 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 CTNSO60931 367 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 SNRNP200O75643 2136 aaKnown RBP11.65□□□□□ -0.54
VPS52-218ENST00000482399 EGFP01133 1207 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 CD3DP04234 171 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 CT62P0C5K7 136 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 GNALP38405 381 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 MAT1AQ00266 395 aaKnown RBP11.65□□□□□ -0.54
VPS52-218ENST00000482399 POU4F2Q12837 409 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 DUSP8Q13202 625 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 ARHGAP11BQ3KRB8 267 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 KIRREL2Q6UWL6 708 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 ZNF765Q7L2R6 523 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 VN1R4Q7Z5H5 301 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 CAMKVQ8NCB2 501 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 OR4C16Q8NGL9 310 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 ZNF296Q8WUU4 475 aaPredicted RBP11.65□□□□□ -0.54
VPS52-218ENST00000482399 ZNRF4Q8WWF5 429 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 ZNF681Q96N22 645 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 C7orf50Q9BRJ6 194 aaKnown RBP11.65□□□□□ -0.54
VPS52-218ENST00000482399 CHST6Q9GZX3 395 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 SLC6A15Q9H2J7 730 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 GRHPRQ9UBQ7 328 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 GPR160Q9UJ42 338 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 DAPP1Q9UN19 280 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 MAP1BP46821 2468 aaKnown RBP11.65□□□□□ -0.54
VPS52-218ENST00000482399 SCN5AQ14524 2016 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 TSPAN11A1L157 253 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 CARNS1A5YM72 827 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 H0YGG7 62 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 KCNAB3O43448 404 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 CTSVO60911 334 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 CISD3P0C7P0 127 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 SPI1P17947 270 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 ARF3P61204 181 aaPredicted RBP11.65□□□□□ -0.54
VPS52-218ENST00000482399 PLA2G7Q13093 441 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 DYRK1AQ13627 763 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 ZNF169Q14929 603 aaPredicted RBP11.65□□□□□ -0.54
VPS52-218ENST00000482399 ITPRIPL2Q3MIP1 535 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 FAM78AQ5JUQ0 283 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 DCAF12L2Q5VW00 463 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 ADAMTSL4Q6UY14 1074 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 ARMC10Q8N2F6 343 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 MFSD9Q8NBP5 474 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 WNT2BQ93097 391 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 TREM1Q9NP99 234 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 IFT46Q9NQC8 304 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 CENPMQ9NSP4 180 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 PLCL2Q9UPR0 1127 aa11.65□□□□□ -0.54
VPS52-218ENST00000482399 A0A0A6YYC8 382 aaPredicted RBP11.65□□□□□ -0.55
VPS52-218ENST00000482399 FITM1A5D6W6 292 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 I3L1I5 382 aaPredicted RBP11.65□□□□□ -0.55
VPS52-218ENST00000482399 AIPO00170 330 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 SUSD5O60279 629 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 RLN2P04090 185 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 ZNF28P17035 718 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 PRSS3P35030 304 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 PBX2P40425 430 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 NANOS3P60323 173 aaKnown RBP11.65□□□□□ -0.55
VPS52-218ENST00000482399 FZD5Q13467 585 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 RIN1Q13671 783 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 GLDNQ6ZMI3 551 aaPredicted RBP11.65□□□□□ -0.55
VPS52-218ENST00000482399 NUDT18Q6ZVK8 323 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 ADGRG3Q86Y34 549 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 FAM219AQ8IW50 185 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 RNF113BQ8IZP6 322 aaKnown RBP11.65□□□□□ -0.55
VPS52-218ENST00000482399 CRIPAKQ8N1N5 446 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 FAM174AQ8TBP5 190 aa11.65□□□□□ -0.55
VPS52-218ENST00000482399 LRRC46Q96FV0 321 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms