RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 NPRL3Q12980 569 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 LARS2Q15031 903 aaKnown RBP14.89□□□□□ -0.03
HMGN1-209ENST00000463631 SLC9B1Q4ZJI4 515 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 C6orf89Q6UWU4 347 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 CLIP4Q8N3C7 705 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 PIK3C3Q8NEB9 887 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 TMEM186Q96B77 213 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF837Q96EG3 531 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-209ENST00000463631 SPATA9Q9BWV2 254 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 TPK1Q9H3S4 243 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 MS4A5Q9H3V2 200 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 ARMC7Q9H6L4 198 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 METTL17Q9H7H0 456 aaPredicted RBP14.89□□□□□ -0.03
HMGN1-209ENST00000463631 B3GNT2Q9NY97 397 aa14.89□□□□□ -0.03
HMGN1-209ENST00000463631 SH3PXD2BA1X283 911 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 TRAF3IP2O43734 574 aaPredicted RBP14.88□□□□□ -0.03
HMGN1-209ENST00000463631 AKAP8O43823 692 aaKnown RBP14.88□□□□□ -0.03
HMGN1-209ENST00000463631 TFP02787 698 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 MSMBP08118 114 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 ACHEP22303 614 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 MRPS11P82912 194 aaKnown RBP14.88□□□□□ -0.03
HMGN1-209ENST00000463631 MSMPQ1L6U9 139 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 ELFN2Q5R3F8 820 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 REP15Q6BDI9 236 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 KRT80Q6KB66 452 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 C5orf46Q6UWT4 87 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF627Q7L945 461 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 SERPINA11Q86U17 422 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 KDM8Q8N371 416 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 GLB1L3Q8NCI6 653 aaPredicted RBP14.88□□□□□ -0.03
HMGN1-209ENST00000463631 CLDND2Q8NHS1 167 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 SLC38A5Q8WUX1 472 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 OR2M2Q96R28 347 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 MRPL37Q9BZE1 423 aaKnown RBP14.88□□□□□ -0.03
HMGN1-209ENST00000463631 C12orf10Q9HB07 376 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 HIF1ANQ9NWT6 349 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 SEC14L4Q9UDX3 406 aa14.88□□□□□ -0.03
HMGN1-209ENST00000463631 AIM2O14862 343 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 OR2T1O43869 369 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 BCHEP06276 602 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 SAGP10523 405 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-209ENST00000463631 RPS5P46782 204 aaKnown RBP14.87□□□□□ -0.03
HMGN1-209ENST00000463631 SLC1A6P48664 564 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 NME5P56597 212 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 FAM69AQ5T7M9 428 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 USP43Q70EL4 1123 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 ADPRHL1Q8NDY3 354 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 SGMS2Q8NHU3 365 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF418Q8TF45 676 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-209ENST00000463631 SLC25A36Q96CQ1 311 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 KTI12Q96EK9 354 aaPredicted RBP14.87□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF75AQ96N20 296 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 SLC6A13Q9NSD5 602 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 THUMPD1Q9NXG2 353 aaKnown RBP14.87□□□□□ -0.03
HMGN1-209ENST00000463631 REV1Q9UBZ9 1251 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF232Q9UNY5 417 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 GRIP1Q9Y3R0 1128 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 GPR45Q9Y5Y3 372 aa14.87□□□□□ -0.03
HMGN1-209ENST00000463631 A0A0G2JPF8 293 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 WDR91A4D1P6 747 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 HNRNPCL2B2RXH8 293 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 HNRNPCL3B7ZW38 293 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 FAM157AC9JC47 383 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 M0R082 166 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 RFXANKO14593 260 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 HNRNPCL1O60812 293 aaKnown RBP14.86□□□□□ -0.03
HMGN1-209ENST00000463631 ZCCHC18P0CG32 403 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 HNRNPCL4P0DMR1 293 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF35P13682 527 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 ETFAP13804 333 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF14P17017 642 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-209ENST00000463631 GLRXP35754 106 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 GPR6P46095 362 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-209ENST00000463631 CAPZA2P47755 286 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 HILS1P60008 231 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 DSTNP60981 165 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 RPS23P62266 143 aaKnown RBP14.86□□□□□ -0.03
HMGN1-209ENST00000463631 ACTG1P63261 375 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 C1DQ13901 141 aaKnown RBP14.86□□□□□ -0.03
HMGN1-209ENST00000463631 GSG1Q2KHT4 349 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 ATG16L1Q676U5 607 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 TEX29Q8N6K0 151 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 OR51F2Q8NH61 342 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF417Q8TAU3 575 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 FAM216AQ8WUB2 273 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 RDH5Q92781 318 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 TMEM19Q96HH6 336 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 ZNF587Q96SQ5 575 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-209ENST00000463631 ZBTB18Q99592 522 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 TMEM109Q9BVC6 243 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 DENND2DQ9H6A0 471 aaPredicted RBP14.86□□□□□ -0.03
HMGN1-209ENST00000463631 SSU72Q9NP77 194 aaKnown RBP14.86□□□□□ -0.03
HMGN1-209ENST00000463631 IFT52Q9Y366 437 aa14.86□□□□□ -0.03
HMGN1-209ENST00000463631 TMEM89A2RUT3 159 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 SDHDO14521 159 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 SEC14L2O76054 403 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 HLA-HP01893 362 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 HPXP02790 462 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 ARFIP2P53365 341 aa14.85□□□□□ -0.03
HMGN1-209ENST00000463631 TMEM33P57088 247 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms